RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 GBP4Q96PP9 640 aa12.41□□□□□ -0.42
PTPN6-219ENST00000542848 MKRN2Q9H000 416 aaKnown RBP12.41□□□□□ -0.42
PTPN6-219ENST00000542848 OLA1Q9NTK5 396 aaKnown RBP12.41□□□□□ -0.42
PTPN6-219ENST00000542848 COQ4Q9Y3A0 265 aa12.41□□□□□ -0.42
PTPN6-219ENST00000542848 ATP6V1DQ9Y5K8 247 aa12.41□□□□□ -0.42
PTPN6-219ENST00000542848 ADAMTS20P59510 1910 aa12.41□□□□□ -0.42
PTPN6-219ENST00000542848 NYNRINQ9P2P1 1898 aaKnown RBP12.4□□□□□ -0.42
PTPN6-219ENST00000542848 KCNJ18B7U540 433 aa12.4□□□□□ -0.42
PTPN6-219ENST00000542848 XPO1O14980 1071 aaKnown RBP12.4□□□□□ -0.42
PTPN6-219ENST00000542848 NCAM1P13591 858 aa12.4□□□□□ -0.42
PTPN6-219ENST00000542848 PTMSP20962 102 aa12.4□□□□□ -0.42
PTPN6-219ENST00000542848 MAOBP27338 520 aa12.4□□□□□ -0.42
PTPN6-219ENST00000542848 HARS2P49590 506 aaKnown RBP12.4□□□□□ -0.42
PTPN6-219ENST00000542848 ZNF445P59923 1031 aa12.4□□□□□ -0.42
PTPN6-219ENST00000542848 PDE4CQ08493 712 aa12.4□□□□□ -0.42
PTPN6-219ENST00000542848 TRIP6Q15654 476 aaKnown RBP12.4□□□□□ -0.42
PTPN6-219ENST00000542848 MPPE1Q53F39 396 aa12.4□□□□□ -0.42
PTPN6-219ENST00000542848 PRCCQ92733 491 aaPredicted RBP12.4□□□□□ -0.42
PTPN6-219ENST00000542848 ARID3AQ99856 593 aa12.4□□□□□ -0.42
PTPN6-219ENST00000542848 NUP58Q9BVL2 599 aa12.4□□□□□ -0.42
PTPN6-219ENST00000542848 GPR174Q9BXC1 333 aa12.4□□□□□ -0.42
PTPN6-219ENST00000542848 GOLPH3LQ9H4A5 285 aa12.4□□□□□ -0.42
PTPN6-219ENST00000542848 KLK13Q9UKR3 277 aa12.4□□□□□ -0.42
PTPN6-219ENST00000542848 CLEC4EQ9ULY5 219 aa12.4□□□□□ -0.42
PTPN6-219ENST00000542848 HBS1LQ9Y450 684 aaKnown RBP12.4□□□□□ -0.42
PTPN6-219ENST00000542848 PCDHB9Q9Y5E1 797 aa12.4□□□□□ -0.42
PTPN6-219ENST00000542848 FREM2Q5SZK8 3169 aa12.4□□□□□ -0.42
PTPN6-219ENST00000542848 ZFYVE26Q68DK2 2539 aa12.4□□□□□ -0.42
PTPN6-219ENST00000542848 SRRM3A6NNA2 597 aaPredicted RBP12.39□□□□□ -0.43
PTPN6-219ENST00000542848 METTL12A8MUP2 240 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 MEI4A8MW99 385 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 SH3BP5O60239 455 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 C7P10643 843 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 ACADMP11310 421 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 COPAP53621 1224 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 BCAT1P54687 386 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 YWHAEP62258 255 aaKnown RBP12.39□□□□□ -0.43
PTPN6-219ENST00000542848 ARID5AQ03989 594 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 BST2Q10589 180 aaKnown RBP12.39□□□□□ -0.43
PTPN6-219ENST00000542848 GRIK2Q13002 908 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 COBLL1Q53SF7 1204 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 SGO2Q562F6 1265 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 DCAF12L1Q5VU92 463 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 TMEM215Q68D42 235 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 BHLHA9Q7RTU4 235 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 RAB44Q7Z6P3 723 aaPredicted RBP12.39□□□□□ -0.43
PTPN6-219ENST00000542848 FMNL3Q8IVF7 1028 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 SCML4Q8N228 414 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 EEF2KMTQ96G04 330 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 ULBP1Q9BZM6 244 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 CIPCQ9C0C6 399 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 PCED1AQ9H1Q7 454 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 LRRC4Q9HBW1 653 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 RMND1Q9NWS8 449 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 HESX1Q9UBX0 185 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 STOML2Q9UJZ1 356 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 TSPAN16Q9UKR8 245 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 KIAA1257Q9ULG3 409 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 KNTC1P50748 2209 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 ACACAQ13085 2346 aa12.39□□□□□ -0.43
PTPN6-219ENST00000542848 PLXNA2O75051 1894 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 TULP2O00295 520 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 SLC16A3O15427 465 aaKnown RBP12.38□□□□□ -0.43
PTPN6-219ENST00000542848 LATS1O95835 1130 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 EPHX1P07099 455 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 ZNF883P0CG24 379 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 VDRP11473 427 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 PRKCHP24723 683 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 PRCPP42785 496 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 FKBP3Q00688 224 aaKnown RBP12.38□□□□□ -0.43
PTPN6-219ENST00000542848 CAMK2GQ13555 558 aaPredicted RBP12.38□□□□□ -0.43
PTPN6-219ENST00000542848 CUL2Q13617 745 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 GOLGA7BQ2TAP0 167 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 CBWD6Q4V339 395 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 CBWD3Q5JTY5 395 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 CBWD5Q5RIA9 395 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 ADGRF1Q5T601 910 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 TCERG1LQ5VWI1 586 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 BSPRYQ5W0U4 402 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 IL27RAQ6UWB1 636 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 SERPINA13PQ6UXR4 307 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 NAXDQ8IW45 347 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 ZC3H3Q8IXZ2 948 aaKnown RBP12.38□□□□□ -0.43
PTPN6-219ENST00000542848 SMYD4Q8IYR2 804 aaPredicted RBP12.38□□□□□ -0.43
PTPN6-219ENST00000542848 CHCHD4Q8N4Q1 142 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 OR2T3Q8NH03 318 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 WFIKKN2Q8TEU8 576 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 RNF139Q8WU17 664 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 SORCS1Q8WY21 1168 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 ZCCHC14Q8WYQ9 949 aaKnown RBP12.38□□□□□ -0.43
PTPN6-219ENST00000542848 KCTD13Q8WZ19 329 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 NDRG1Q92597 394 aaKnown RBP12.38□□□□□ -0.43
PTPN6-219ENST00000542848 TMA16Q96EY4 203 aaKnown RBP12.38□□□□□ -0.43
PTPN6-219ENST00000542848 CAMK1GQ96NX5 476 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 TSG101Q99816 390 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 IRX2Q9BZI1 471 aaPredicted RBP12.38□□□□□ -0.43
PTPN6-219ENST00000542848 MIR1-1HGQ9H1L0 117 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 CNGB3Q9NQW8 809 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 ABCC13Q9NSE7 274 aa12.38□□□□□ -0.43
PTPN6-219ENST00000542848 PLA2G4CQ9UP65 541 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms