RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 XPNPEP3Q9NQH7 507 aa13.33□□□□□ -0.28
DDX11-223ENST00000542838 BTBD7Q9P203 1132 aa13.33□□□□□ -0.28
DDX11-223ENST00000542838 FZD1Q9UP38 647 aa13.33□□□□□ -0.28
DDX11-223ENST00000542838 DOCK1Q14185 1865 aa13.33□□□□□ -0.28
DDX11-223ENST00000542838 ALDOAP04075 364 aaKnown RBP13.32□□□□□ -0.28
DDX11-223ENST00000542838 SERPINE1P05121 402 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 YY1P25490 414 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 PEX2P28328 305 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 SDC4P31431 198 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 IDH3AP50213 366 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 NDST1P52848 882 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 GBE1Q04446 702 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 PDE1CQ14123 709 aaPredicted RBP13.32□□□□□ -0.28
DDX11-223ENST00000542838 PCLAFQ15004 111 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 PGM2L1Q6PCE3 622 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 MAVSQ7Z434 540 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 C10orf107Q8IVU9 208 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 DEFB107AQ8IZN7 70 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 EFCAB3Q8N7B9 438 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 ACMSDQ8TDX5 336 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 ACTRT2Q8TDY3 377 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 FAM167AQ96KS9 214 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 ZNF670Q9BS34 389 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 CYP3A43Q9HB55 503 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 GBA2Q9HCG7 927 aaPredicted RBP13.32□□□□□ -0.28
DDX11-223ENST00000542838 TRIP11Q15643 1979 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 LOC100653049A0A140TA62 436 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 KRT34O76011 436 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 P4HA1P13674 534 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 CRADDP78560 199 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 VWA5B1Q5TIE3 1220 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 PACS1Q6VY07 963 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 ATG14Q6ZNE5 492 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 EEPD1Q7L9B9 569 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 TRIM50Q86XT4 487 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 CDKL2Q92772 493 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 WRNIP1Q96S55 665 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 FZD8Q9H461 694 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 DNAJC28Q9NX36 388 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 SLC4A7Q9Y6M7 1214 aa13.32□□□□□ -0.28
DDX11-223ENST00000542838 TXNDC9O14530 226 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 ETS2P15036 469 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 SLC10A2Q12908 348 aaPredicted RBP13.31□□□□□ -0.28
DDX11-223ENST00000542838 PEX6Q13608 980 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 TRIP10Q15642 601 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 SMAD1Q15797 465 aaKnown RBP13.31□□□□□ -0.28
DDX11-223ENST00000542838 TCHHL1Q5QJ38 904 aaPredicted RBP13.31□□□□□ -0.28
DDX11-223ENST00000542838 NCSTNQ92542 709 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 CMTM5Q96DZ9 223 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 TBCBQ99426 244 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 FAM96AQ9H5X1 160 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 DCDC2Q9UHG0 476 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 BARX2Q9UMQ3 279 aaPredicted RBP13.31□□□□□ -0.28
DDX11-223ENST00000542838 POMPQ9Y244 141 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 NR2E3Q9Y5X4 410 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 SPDYE16A6NNV3 312 aaPredicted RBP13.31□□□□□ -0.28
DDX11-223ENST00000542838 GPR25O00155 361 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 RAG1P15918 1043 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 VCLP18206 1134 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 ITGAXP20702 1163 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 DLG1Q12959 904 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 LAMB3Q13751 1172 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 LY6KQ17RY6 165 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 MMEL1Q495T6 779 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 KCNT2Q6UVM3 1135 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 LCLAT1Q6UWP7 414 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 NCAPG2Q86XI2 1143 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 HPS6Q86YV9 775 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 C12orf29Q8N999 325 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 HPDLQ96IR7 371 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 CLMNQ96JQ2 1002 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 C12orf42Q96LP6 360 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 SORT1Q99523 831 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 MYO18AQ92614 2054 aaKnown RBP13.31□□□□□ -0.28
DDX11-223ENST00000542838 DPYSL4O14531 572 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 MDM4O15151 490 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 GAS2O43903 313 aaKnown RBP13.31□□□□□ -0.28
DDX11-223ENST00000542838 ZMPSTE24O75844 475 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 PFKMP08237 780 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 STAG3L1P0CL83 205 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 ATICP31939 592 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 XIAPP98170 497 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 BTKQ06187 659 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 SEMA5AQ13591 1074 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 GOLGA7BQ2TAP0 167 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 HEATR6Q6AI08 1181 aaKnown RBP13.31□□□□□ -0.28
DDX11-223ENST00000542838 NME8Q8N427 588 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 RNF217Q8TC41 542 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 TRAPPC12Q8WVT3 735 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 DHX35Q9H5Z1 703 aaKnown RBP13.31□□□□□ -0.28
DDX11-223ENST00000542838 IFT122Q9HBG6 1241 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 PIH1D1Q9NWS0 290 aaKnown RBP13.31□□□□□ -0.28
DDX11-223ENST00000542838 TBC1D30Q9Y2I9 924 aa13.31□□□□□ -0.28
DDX11-223ENST00000542838 SF3B1O75533 1304 aaKnown RBP eCLIP13.3□□□□□ -0.285e-8■■■■■ 110.6
DDX11-223ENST00000542838 PEX10O60683 326 aa13.3□□□□□ -0.28
DDX11-223ENST00000542838 MYL4P12829 197 aa13.3□□□□□ -0.28
DDX11-223ENST00000542838 DESP17661 470 aa13.3□□□□□ -0.28
DDX11-223ENST00000542838 GRK2P25098 689 aa13.3□□□□□ -0.28
DDX11-223ENST00000542838 GRIA2P42262 883 aa13.3□□□□□ -0.28
DDX11-223ENST00000542838 ABCE1P61221 599 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms