RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-210	ENST00000542817	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	CELF5	Q8N6W0	485 aa	Known RBP	11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	KIAA1524	Q8TCG1	905 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	CHFR	Q96EP1	664 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ASB2	Q96Q27	587 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	KXD1	Q9BQD3	176 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	FAM83C	Q9BQN1	747 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	KCNK12	Q9HB15	430 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	CD320	Q9NPF0	282 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	LIMD1	Q9UGP4	676 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	IP6K2	Q9UHH9	426 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	STAP1	Q9ULZ2	295 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	NEU3	Q9UQ49	428 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ZKSCAN5	Q9Y2L8	839 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	HYOU1	Q9Y4L1	999 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	SNX10	Q9Y5X0	201 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	NUMBL	Q9Y6R0	609 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	MYO10	Q9HD67	2058 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	GOLGA6L7	A0A1B0GV03	622 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	E2F8	A0AVK6	867 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	FAM72C	H0Y354	149 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	MOCS3	O95396	460 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ASGR2	P07307	311 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	IRF1	P10914	325 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	COMT	P21964	271 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	CORO1A	P31146	461 aa	Known RBP	11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	SLC6A4	P31645	630 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	MAN1A1	P33908	653 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ADRA1B	P35368	520 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ARSE	P51690	589 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	DEUP1	Q05D60	604 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	SCAP	Q12770	1279 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	KIF5A	Q12840	1032 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	PIGH	Q14442	188 aa	Predicted RBP	11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	CA9	Q16790	459 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	GAB4	Q2WGN9	574 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	FAM72A	Q5TYM5	149 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	RNF43	Q68DV7	783 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	FAM72D	Q6L9T8	149 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	C14orf80	Q86SX3	495 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	FAM72B	Q86X60	149 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	MFSD6L	Q8IWD5	586 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	KIAA1958	Q8N8K9	716 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	TDRD5	Q8NAT2	981 aa	Known RBP	11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	AZIN2	Q96A70	460 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	PLD4	Q96BZ4	506 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	TKTL2	Q9H0I9	626 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ZFP14	Q9HCL3	533 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	COX16	Q9P0S2	106 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	ALG6	Q9Y672	507 aa		11.09	□□□□□ -0.63
NPIPB3-210	ENST00000542817	F5	P12259	2224 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	MACROD2	A1Z1Q3	448 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	SHISA7	A6NL88	538 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	FANCG	O15287	622 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	PAGE1	O75459	146 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	IPO7	O95373	1038 aa	Known RBP	11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	F9	P00740	461 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	CCR1	P32246	355 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	GGCX	P38435	758 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	NOP2	P46087	812 aa	Known RBP	11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	IRAK1	P51617	712 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	SGSH	P51688	502 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	KPNA1	P52294	538 aa	Predicted RBP	11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	SEMA3B	Q13214	749 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	MESD	Q14696	234 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	ACAP1	Q15027	740 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	AAK1	Q2M2I8	961 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	EML3	Q32P44	896 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	C5orf22	Q49AR2	442 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	ATP13A4	Q4VNC1	1196 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	BRMS1L	Q5PSV4	323 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	IER5L	Q5T953	404 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	MANEAL	Q5VSG8	457 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	TRIM68	Q6AZZ1	485 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	C11orf63	Q6NUN7	778 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	ANKS1B	Q7Z6G8	1248 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	DENND1C	Q8IV53	801 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	ADGRG2	Q8IZP9	1017 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	PYROXD2	Q8N2H3	581 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	SLC44A3	Q8N4M1	653 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	RNF10	Q8N5U6	811 aa	Known RBP	11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	BPIFB1	Q8TDL5	484 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	NTAN1	Q96AB6	310 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	ZFYVE19	Q96K21	471 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	NACA2	Q9H009	215 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	KIF9	Q9HAQ2	790 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	LUC7L	Q9NQ29	371 aa	Known RBP	11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	LZTFL1	Q9NQ48	299 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	HPS4	Q9NQG7	708 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	TRMT1	Q9NXH9	659 aa	Known RBP	11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	ZNF212	Q9UDV6	495 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	PRKAG3	Q9UGI9	489 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	FZD10	Q9ULW2	581 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	HS3ST4	Q9Y661	456 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	WNT6	Q9Y6F9	365 aa		11.08	□□□□□ -0.64
NPIPB3-210	ENST00000542817	COL4A3	Q01955	1670 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms