RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 CRYBB1P53674 252 aaPredicted RBP6.76□□□□□ -1.33
PTPRO-208ENST00000542557 AIF1P55008 147 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 SYCP2LQ5T4T6 812 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 OTUD1Q5VV17 481 aaPredicted RBP6.76□□□□□ -1.33
PTPRO-208ENST00000542557 MARK2Q7KZI7 788 aaKnown RBP6.76□□□□□ -1.33
PTPRO-208ENST00000542557 PIGZQ86VD9 579 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 B3GALNT2Q8NCR0 500 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 RFWD2Q8NHY2 731 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 SH3TC2Q8TF17 1288 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 TMEM40Q8WWA1 233 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 TTC17Q96AE7 1141 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 SKA1Q96BD8 255 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 SLC2A13Q96QE2 648 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 LPIN3Q9BQK8 851 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 FERMT1Q9BQL6 677 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 DUSP16Q9BY84 665 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 ARHGEF4Q9NR80 690 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 MOCS1Q9NZB8 636 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 NOP53Q9NZM5 478 aaKnown RBP6.76□□□□□ -1.33
PTPRO-208ENST00000542557 STK38LQ9Y2H1 464 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 CLGNO14967 610 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 STK10O94804 968 aaKnown RBP6.76□□□□□ -1.33
PTPRO-208ENST00000542557 PDGFRBP09619 1106 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 DLDP09622 509 aaKnown RBP6.76□□□□□ -1.33
PTPRO-208ENST00000542557 GOT1P17174 413 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 NPR3P17342 541 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 BGNP21810 368 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 PTPN4P29074 926 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 HOXC8P31273 242 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 CRHR1P34998 444 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 PSEN2P49810 448 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 ARFIP2P53365 341 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 MRPS5P82675 430 aaKnown RBP6.76□□□□□ -1.33
PTPRO-208ENST00000542557 SOX4Q06945 474 aaPredicted RBP6.76□□□□□ -1.33
PTPRO-208ENST00000542557 KRT72Q14CN4 511 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 E2F5Q15329 346 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 NBPF20Q3BBV1 942 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 TAF1BQ53T94 588 aaPredicted RBP6.76□□□□□ -1.33
PTPRO-208ENST00000542557 ANKRD20A2Q5SQ80 823 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 STXBP5Q5T5C0 1151 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 ANKRD20A1Q5TYW2 823 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 ANKRD20A3Q5VUR7 823 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 LRRC8BQ6P9F7 803 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 ZNF449Q6P9G9 518 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 CDHR3Q6ZTQ4 885 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 MTDHQ86UE4 582 aaKnown RBP6.76□□□□□ -1.33
PTPRO-208ENST00000542557 TLK2Q86UE8 772 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 OSTM1Q86WC4 334 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 DEFB106AQ8N104 65 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 DNAJB3Q8WWF6 145 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 PMM1Q92871 262 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 SLC9A7Q96T83 725 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 NPY6RQ99463 290 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 APOL6Q9BWW8 343 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 C12orf65Q9H3J6 166 aaKnown RBP6.76□□□□□ -1.33
PTPRO-208ENST00000542557 SIRPGQ9P1W8 387 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 HAO1Q9UJM8 370 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 STAP1Q9ULZ2 295 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 RAD54BQ9Y620 910 aa6.76□□□□□ -1.33
PTPRO-208ENST00000542557 COL4A4P53420 1690 aaPredicted RBP6.75□□□□□ -1.33
PTPRO-208ENST00000542557 A8MUI8 341 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 BIRC5O15392 142 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 MFSD11O43934 449 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 HAUS5O94927 633 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 ATP5BP06576 529 aaKnown RBP6.75□□□□□ -1.33
PTPRO-208ENST00000542557 AMPD1P23109 780 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 CPT1AP50416 773 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 LILRA4P59901 499 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 ADIGQ0VDE8 80 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 HIC1Q14526 733 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 PAFAH1B3Q15102 231 aaKnown RBP6.75□□□□□ -1.33
PTPRO-208ENST00000542557 MORN1Q5T089 497 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 ZNF618Q5T7W0 954 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 ATG16L1Q676U5 607 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 FAM131BQ86XD5 332 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.75□□□□□ -1.33
PTPRO-208ENST00000542557 CFAP61Q8NHU2 1237 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 ACMSDQ8TDX5 336 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 RNF139Q8WU17 664 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 NTAN1Q96AB6 310 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 TBC1D31Q96DN5 1066 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 STAMBPL1Q96FJ0 436 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 NAT9Q9BTE0 207 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 KATNAL1Q9BW62 490 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 TBC1D10AQ9BXI6 508 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 KCNK13Q9HB14 408 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 DCTN4Q9UJW0 460 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 TMA7Q9Y2S6 64 aaKnown RBP6.75□□□□□ -1.33
PTPRO-208ENST00000542557 Q9Y3F1 56 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 IPPQ9Y573 584 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 A0A0G2JND7 137 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 C9IYK1 514 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 I3L4J1 428 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 GABRDO14764 452 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 PPP1R12AO14974 1030 aaPredicted RBP6.75□□□□□ -1.33
PTPRO-208ENST00000542557 FBXO21O94952 628 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 CBX6O95503 412 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 ZNF865P0CJ78 1059 aaPredicted RBP6.75□□□□□ -1.33
PTPRO-208ENST00000542557 MAP2K2P36507 400 aa6.75□□□□□ -1.33
PTPRO-208ENST00000542557 CCNG1P51959 295 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms