RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 POF1BQ8WVV4 589 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 LRRC39Q96DD0 335 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 PTCD3Q96EY7 689 aaKnown RBP10.77□□□□□ -0.69
CHFR-219ENST00000541341 APOPT1Q96IL0 206 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 PCDHB18PQ96TA0 734 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 NTPCRQ9BSD7 190 aaKnown RBP10.77□□□□□ -0.69
CHFR-219ENST00000541341 DHRS4Q9BTZ2 278 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 CYP26B1Q9NR63 512 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 CHST7Q9NS84 486 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 PLK2Q9NYY3 685 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 ATXN10Q9UBB4 475 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 HEY2Q9UBP5 337 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 NKX1-2Q9UD57 310 aaPredicted RBP10.77□□□□□ -0.69
CHFR-219ENST00000541341 TAGLN3Q9UI15 199 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 GGT7Q9UJ14 662 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 ZNF180Q9UJW8 692 aa10.77□□□□□ -0.69
CHFR-219ENST00000541341 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.76□□□□□ -0.69
CHFR-219ENST00000541341 CFAP69A5D8W1 941 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 RRN3P2A6NIE6 340 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 A8MUI8 341 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 ANKRD63C9JTQ0 380 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 E7ESA3 106 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 TP73O15350 636 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 GAS2O43903 313 aaKnown RBP10.76□□□□□ -0.69
CHFR-219ENST00000541341 MAFO75444 373 aaPredicted RBP10.76□□□□□ -0.69
CHFR-219ENST00000541341 SKAP2O75563 359 aaPredicted RBP10.76□□□□□ -0.69
CHFR-219ENST00000541341 DGAT1O75907 488 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 TM7SF2O76062 418 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 INHBAP08476 426 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 PDHA1P08559 390 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 KRT5P13647 590 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 RRM1P23921 792 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 RPA3P35244 121 aaPredicted RBP10.76□□□□□ -0.69
CHFR-219ENST00000541341 RFC5P40937 340 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 SERPINB9P50453 376 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 POLE2P56282 527 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 NHLH1Q02575 133 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 PPP3CAQ08209 521 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 ADAM15Q13444 863 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 HNRNPDQ14103 355 aaKnown RBP10.76□□□□□ -0.69
CHFR-219ENST00000541341 COL19A1Q14993 1142 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 FAM102BQ5T8I3 360 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 IER5Q5VY09 327 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 SLC47A2Q86VL8 602 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 CRLF3Q8IUI8 442 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 MAP4K3Q8IVH8 894 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 ZDHHC14Q8IZN3 488 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 GPD1LQ8N335 351 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 LINC01465Q8N7H1 131 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 NIPA2Q8N8Q9 360 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 BANPQ8N9N5 519 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 MCPH1Q8NEM0 835 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 HELQQ8TDG4 1101 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 DDI1Q8WTU0 396 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 SREK1Q8WXA9 508 aaKnown RBP10.76□□□□□ -0.69
CHFR-219ENST00000541341 DDX1Q92499 740 aaKnown RBP10.76□□□□□ -0.69
CHFR-219ENST00000541341 CLP1Q92989 425 aaKnown RBP10.76□□□□□ -0.69
CHFR-219ENST00000541341 SKA1Q96BD8 255 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 IFT43Q96FT9 208 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 OXNAD1Q96HP4 312 aaPredicted RBP10.76□□□□□ -0.69
CHFR-219ENST00000541341 ZNF668Q96K58 619 aaPredicted RBP10.76□□□□□ -0.69
CHFR-219ENST00000541341 ZFRQ96KR1 1074 aaKnown RBP10.76□□□□□ -0.69
CHFR-219ENST00000541341 C9orf72Q96LT7 481 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 SYT15Q9BQS2 421 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 CADM1Q9BY67 442 aaKnown RBP10.76□□□□□ -0.69
CHFR-219ENST00000541341 GCOM2Q9BZD3 368 aaPredicted RBP10.76□□□□□ -0.69
CHFR-219ENST00000541341 IMPG2Q9BZV3 1241 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 LMAN2LQ9H0V9 348 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 PNPLA8Q9NP80 782 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 NPHS2Q9NP85 383 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 CHCHD3Q9NX63 227 aaKnown RBP10.76□□□□□ -0.69
CHFR-219ENST00000541341 CLEC1BQ9P126 229 aa10.76□□□□□ -0.69
CHFR-219ENST00000541341 SEPT9Q9UHD8 586 aaPredicted RBP10.76□□□□□ -0.69
CHFR-219ENST00000541341 GOLGA8QA0A0J9YX86 632 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 TMEM150BA6NC51 233 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 GOLGA8OA6NCC3 632 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 SIGLEC16A6NMB1 481 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 TBKBP1A7MCY6 615 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 GOLGA8NF8WBI6 632 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 KRT38O76015 456 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 C22orf31O95567 290 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 GLP2RO95838 553 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 DHRS4L1P0CG22 281 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 ACTR3P61158 418 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 SLC18A2Q05940 514 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 KCNA1Q09470 495 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 PDIA2Q13087 525 aaKnown RBP10.75□□□□□ -0.69
CHFR-219ENST00000541341 GPS1Q13098 491 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 SMAD4Q13485 552 aaKnown RBP10.75□□□□□ -0.69
CHFR-219ENST00000541341 SURF1Q15526 300 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 KHDC1Q4VXA5 237 aaKnown RBP10.75□□□□□ -0.69
CHFR-219ENST00000541341 XKR9Q5GH70 373 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 IER5LQ5T953 404 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 RNASEH2BQ5TBB1 312 aaKnown RBP10.75□□□□□ -0.69
CHFR-219ENST00000541341 TTC39BQ5VTQ0 682 aaPredicted RBP10.75□□□□□ -0.69
CHFR-219ENST00000541341 PLA2G4FQ68DD2 849 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 LLGL2Q6P1M3 1020 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 MARK2Q7KZI7 788 aaKnown RBP10.75□□□□□ -0.69
CHFR-219ENST00000541341 PALB2Q86YC2 1186 aa10.75□□□□□ -0.69
CHFR-219ENST00000541341 NPAS4Q8IUM7 802 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms