RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 TCEAL8Q8IYN2 117 aa14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 EIF1ADQ8N9N8 165 aaKnown RBP14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 AUTS2Q8WXX7 1259 aa14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 ATG4AQ8WYN0 398 aa14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 OVCA2Q8WZ82 227 aa14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 NKD2Q969F2 451 aaPredicted RBP14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 SERPINB11Q96P15 392 aa14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 WDCPQ9H6R7 721 aa14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 CYP4F11Q9HBI6 524 aa14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 EPB41L5Q9HCM4 733 aa14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 ARFGAP3Q9NP61 516 aa14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 OLA1Q9NTK5 396 aaKnown RBP14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 RAPGEFL1Q9UHV5 662 aa14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 DRG1Q9Y295 367 aaKnown RBP14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 UTP11Q9Y3A2 253 aaKnown RBP14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 YIPF1Q9Y548 306 aa14.77□□□□□ -0.04
CYB561A3-216ENST00000540755 MTCL1Q9Y4B5 1905 aaKnown RBP14.77□□□□□ -0.05
CYB561A3-216ENST00000540755 H3BNC9 293 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 CSH1P0DML2 217 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 CSH2P0DML3 217 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 COL9A1P20849 921 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 TGM2P21980 687 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 ELF1P32519 619 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 CTNNB1P35222 781 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 ARL4AP40617 200 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 ALDH1A3P47895 512 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 KCNJ1P48048 391 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 UBE3AQ05086 875 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 SNX1Q13596 522 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 MTMR3Q13615 1198 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 CUL1Q13616 776 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 MAP9Q49MG5 647 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 BRMS1LQ5PSV4 323 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 ZNF276Q8N554 614 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 PQLC3Q8N755 202 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 PDZD8Q8NEN9 1154 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 PCDH19Q8TAB3 1148 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 SLC35B2Q8TB61 432 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 GIPC2Q8TF65 315 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 CASP10Q92851 521 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 SAMD11Q96NU1 681 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 ERP44Q9BS26 406 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.76□□□□□ -0.055e-14■□□□□ 8.9
CYB561A3-216ENST00000540755 ARHGEF38Q9NXL2 777 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 IRAK3Q9Y616 596 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 ZSCAN5CA6NGD5 496 aaPredicted RBP14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 C5orf67F2Z3F1 127 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 H3BRJ5 948 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 APOL1O14791 398 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 GAS8O95995 478 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 RARGP13631 454 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 ZFXP17010 805 aaPredicted RBP14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 DRG2P55039 364 aaKnown RBP14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 VCPP55072 806 aaKnown RBP14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 DYNLT1P63172 113 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 OTUD4Q01804 1114 aaKnown RBP14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 SEMA3BQ13214 749 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 NNTQ13423 1086 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 BYSLQ13895 437 aaKnown RBP14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 PPP2R5DQ14738 602 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 COL19A1Q14993 1142 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 OASLQ15646 514 aaKnown RBP14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 SNX30Q5VWJ9 437 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 ACTL9Q8TC94 416 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 CASKIN2Q8WXE0 1202 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 TRMT2BQ96GJ1 504 aaKnown RBP14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 MYRFLQ96LU7 910 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 CSPG4P5Q96PW8 444 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 TRIM51Q9BSJ1 452 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 TKTL2Q9H0I9 626 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 PLEKHA4Q9H4M7 779 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 CD320Q9NPF0 282 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 FAM114A2Q9NRY5 505 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 CWC15Q9P013 229 aaKnown RBP14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 SFMBT1Q9UHJ3 866 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 DNPEPQ9ULA0 475 aa14.76□□□□□ -0.05
CYB561A3-216ENST00000540755 ANAPC1Q9H1A4 1944 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 OBSL1O75147 1896 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 ESYT3A0FGR9 886 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 I6L893 689 aaPredicted RBP14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 CXCL14O95715 111 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 RB1P06400 928 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 ITGAVP06756 1048 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 CNPP09543 421 aaKnown RBP14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 HMGA1P17096 107 aaKnown RBP14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 KCNA5P22460 613 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 CCR1P32246 355 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 HCAR3P49019 387 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 PLD1Q13393 1074 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 GPM6BQ13491 265 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 PTK6Q13882 451 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 VEPH1Q14D04 833 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 NOMO1Q15155 1222 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 LEXMQ3ZCV2 418 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 DUPD1Q68J44 220 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 TMC7Q7Z402 723 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 PYROXD2Q8N2H3 581 aa14.75□□□□□ -0.05
CYB561A3-216ENST00000540755 PLD5Q8N7P1 536 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms