RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 MPP7Q5T2T1 576 aa13.68□□□□□ -0.22
SEMA4D-223ENST00000540475 ENOSF1Q7L5Y1 443 aa13.68□□□□□ -0.22
SEMA4D-223ENST00000540475 ANKS1BQ7Z6G8 1248 aa13.68□□□□□ -0.22
SEMA4D-223ENST00000540475 PGBD3Q8N328 593 aa13.68□□□□□ -0.22
SEMA4D-223ENST00000540475 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.68□□□□□ -0.22
SEMA4D-223ENST00000540475 EDEM1Q92611 657 aa13.68□□□□□ -0.22
SEMA4D-223ENST00000540475 BHMTQ93088 406 aa13.68□□□□□ -0.22
SEMA4D-223ENST00000540475 ZNF419Q96HQ0 510 aaPredicted RBP13.68□□□□□ -0.22
SEMA4D-223ENST00000540475 CACNA2D2Q9NY47 1150 aa13.68□□□□□ -0.22
SEMA4D-223ENST00000540475 ASPMQ8IZT6 3477 aa13.68□□□□□ -0.22
SEMA4D-223ENST00000540475 TPRP12270 2363 aaKnown RBP13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 C4orf47A7E2U8 309 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 KCNK5O95279 499 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 IGLV3-19P01714 112 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 LTFP02788 710 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 LCP1P13796 627 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 BRD2P25440 801 aaKnown RBP13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 IL12RB1P42701 662 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 LMAN2Q12907 356 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 NNTQ13423 1086 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 IRF2BP1Q8IU81 584 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 DDI1Q8WTU0 396 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 UCMAQ8WVF2 138 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 PIGKQ92643 395 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 FAM81BQ96LP2 452 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 SLC4A5Q9BY07 1137 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 INTS2Q9H0H0 1204 aaKnown RBP13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 TMEM9BQ9NQ34 198 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 ITM2CQ9NQX7 267 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 USP36Q9P275 1121 aaKnown RBP13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 RAD54BQ9Y620 910 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 ACACBO00763 2458 aa13.67□□□□□ -0.22
SEMA4D-223ENST00000540475 GTPBP10A4D1E9 387 aaKnown RBP13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 M0QYV0 167 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 ZBTB24O43167 697 aaPredicted RBP13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 IRAK2O43187 625 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 CALCAP01258 141 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 NCAM1P13591 858 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 ITPKAP23677 461 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 PMLP29590 882 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 HLA-FP30511 346 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 RGS7P49802 495 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 SHC2P98077 582 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 RPL6Q02878 288 aaKnown RBP13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 ZNF33AQ06730 810 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 EIF4EBP2Q13542 120 aaPredicted RBP13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 ZNF234Q14588 700 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 FUT11Q495W5 492 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 FAM133BQ5BKY9 247 aaKnown RBP13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 N4BP2L1Q5TBK1 243 aaPredicted RBP13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 LYSMD4Q5XG99 296 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 NUGGCQ68CJ6 796 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 TMEM110Q86TL2 294 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 SLC41A1Q8IVJ1 513 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 UNC45BQ8IWX7 931 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 CEP76Q8TAP6 659 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 CLEC4CQ8WTT0 213 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 ZNF606Q8WXB4 792 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 TMA16Q96EY4 203 aaKnown RBP13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 SLC39A13Q96H72 371 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 LMLNQ96KR4 655 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 MKRN2Q9H000 416 aaKnown RBP13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 TMEM245Q9H330 911 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 CAPN10Q9HC96 672 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 UBE2TQ9NPD8 197 aaPredicted RBP13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 NFE2L3Q9Y4A8 694 aa13.66□□□□□ -0.22
SEMA4D-223ENST00000540475 UPK3BL1B0FP48 263 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 UPK3BL2E5RIL1 263 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 SART1O43290 800 aaKnown RBP13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 MSI1O43347 362 aaKnown RBP13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 CSRP1P21291 193 aaKnown RBP13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 ACADSBP45954 432 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 COPAP53621 1224 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 STARD3Q14849 445 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 DUOXA1Q1HG43 343 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 TRIM61Q5EBN2 209 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 PIK3R6Q5UE93 754 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 DAB2IPQ5VWQ8 1189 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 TRIM65Q6PJ69 517 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 RABEPKQ7Z6M1 372 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 ADIPOR2Q86V24 386 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 SCUBE3Q8IX30 993 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 MLKLQ8NB16 471 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 WFIKKN2Q8TEU8 576 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 PRDM16Q9HAZ2 1276 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 WSB2Q9NYS7 404 aaPredicted RBP13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 SLC6A14Q9UN76 642 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 CHD8Q9HCK8 2581 aa13.65□□□□□ -0.22
SEMA4D-223ENST00000540475 BECN2A8MW95 431 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 PIK3R2O00459 728 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 MED7O43513 233 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 ACSL4O60488 711 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 IGLV3-25P01717 112 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 SERPINF2P08697 491 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 SLC6A4P31645 630 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 SLC11A2P49281 568 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 TBX4P57082 545 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 CAMK2GQ13555 558 aaPredicted RBP13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 PTPRNQ16849 979 aa13.64□□□□□ -0.23
SEMA4D-223ENST00000540475 DENND1BQ6P3S1 775 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms