RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 RUNX3Q13761 415 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 NR1I3Q14994 352 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 TAF3Q5VWG9 929 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 BSPRYQ5W0U4 402 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 SFTPA1Q8IWL2 248 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 ADGRG2Q8IZP9 1017 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 OLIG1Q8TAK6 271 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 OSCP1Q8WVF1 389 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 EZH1Q92800 747 aaPredicted RBP11.94□□□□□ -0.5
TMEM258-205ENST00000540434 CPXM1Q96SM3 734 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 NAT10Q9H0A0 1025 aaKnown RBP11.94□□□□□ -0.5
TMEM258-205ENST00000540434 LRRC4Q9HBW1 653 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 FSCN3Q9NQT6 498 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 DUS2Q9NX74 493 aaKnown RBP11.94□□□□□ -0.5
TMEM258-205ENST00000540434 ZMYM5Q9UJ78 669 aa11.94□□□□□ -0.5
TMEM258-205ENST00000540434 A0A1B0GTH6 734 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 E5RJQ4 531 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 ATG13O75143 517 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 RHOBTB1O94844 696 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 HMBSP08397 361 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 MMEP08473 750 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 PFKLP17858 780 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 TRIM21P19474 475 aaKnown RBP11.93□□□□□ -0.5
TMEM258-205ENST00000540434 SLC6A11P48066 632 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 TUBP50607 506 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 PITX1P78337 314 aaPredicted RBP11.93□□□□□ -0.5
TMEM258-205ENST00000540434 EFEMP1Q12805 493 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 ELF2Q15723 593 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 C2CD6Q53TS8 623 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 C10orf120Q5SQS8 335 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 E4F1Q66K89 784 aaPredicted RBP11.93□□□□□ -0.5
TMEM258-205ENST00000540434 RHBDF2Q6PJF5 856 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 TMEM110Q86TL2 294 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 MIB1Q86YT6 1006 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 BBS7Q8IWZ6 715 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 C1orf131Q8NDD1 294 aaKnown RBP11.93□□□□□ -0.5
TMEM258-205ENST00000540434 HSFY1Q96LI6 401 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 PCDHB18PQ96TA0 734 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 CCDC86Q9H6F5 360 aaKnown RBP11.93□□□□□ -0.5
TMEM258-205ENST00000540434 ECT2Q9H8V3 914 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 KIF9Q9HAQ2 790 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 ST7Q9NRC1 585 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 CLIC5Q9NZA1 410 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 SFMBT1Q9UHJ3 866 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 NOCTQ9UK39 431 aaKnown RBP11.93□□□□□ -0.5
TMEM258-205ENST00000540434 PCDHGC3Q9UN70 934 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 CEP192Q8TEP8 1941 aa11.93□□□□□ -0.5
TMEM258-205ENST00000540434 HECTD1Q9ULT8 2610 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 TRDMT1O14717 391 aaKnown RBP11.92□□□□□ -0.5
TMEM258-205ENST00000540434 TRIM24O15164 1050 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 AP5Z1O43299 807 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 STC2O76061 302 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 ERBB2P04626 1255 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 PTMSP20962 102 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 BCKDHBP21953 392 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 GJA4P35212 333 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 ATP5C1P36542 298 aaKnown RBP11.92□□□□□ -0.5
TMEM258-205ENST00000540434 PBX1P40424 430 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 FANCCQ00597 558 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 PTK2Q05397 1052 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 PDCLQ13371 301 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 STILQ15468 1287 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 ITPRIPL2Q3MIP1 535 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 PTPN20Q4JDL3 420 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 FKBP15Q5T1M5 1219 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 SYPL2Q5VXT5 272 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 C12orf40Q86WS4 652 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 ZNF276Q8N554 614 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 PNPLA1Q8N8W4 532 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 EPS8L1Q8TE68 723 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 BAP1Q92560 729 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 FAM81BQ96LP2 452 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 DNAI2Q9GZS0 605 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 LHX5Q9H2C1 402 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 SLC32A1Q9H598 525 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 CNGB3Q9NQW8 809 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 EBF1Q9UH73 591 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 RASAL2Q9UJF2 1139 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 NAALADL1Q9UQQ1 740 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 APC2O95996 2303 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 ACACAQ13085 2346 aa11.92□□□□□ -0.5
TMEM258-205ENST00000540434 SHROOM3Q8TF72 1996 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 MSI1O43347 362 aaKnown RBP11.91□□□□□ -0.5
TMEM258-205ENST00000540434 RNF40O75150 1001 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 EGFP01133 1207 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 CYP17A1P05093 508 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 SOX5P35711 763 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 OPRD1P41143 372 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 GALK1P51570 392 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 SLC8A3P57103 927 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 PLCB2Q00722 1185 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 FMO1Q01740 532 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 DHCR24Q15392 516 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 PMS2CLQ68D20 193 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 CC2D1AQ6P1N0 951 aaPredicted RBP11.91□□□□□ -0.5
TMEM258-205ENST00000540434 KLHDC10Q6PID8 442 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 Q6ZNB5 142 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 HTR3DQ70Z44 454 aa11.91□□□□□ -0.5
TMEM258-205ENST00000540434 RAB44Q7Z6P3 723 aaPredicted RBP11.91□□□□□ -0.5
TMEM258-205ENST00000540434 PIP4P1Q86T03 277 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms