RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 FNDC3BQ53EP0 1204 aaKnown RBP13.06□□□□□ -0.32
COPS7A-211ENST00000540408 C1orf220Q5T0J3 134 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 KRT39Q6A163 491 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 TMPRSS7Q7RTY8 843 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 PIGZQ86VD9 579 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 CACUL1Q86Y37 369 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 FAM186BQ8IYM0 893 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 GALNT15Q8N3T1 639 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 WFIKKN2Q8TEU8 576 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 RNF139Q8WU17 664 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 LHX5Q9H2C1 402 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 FBRSQ9HAH7 460 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 TMEM8AQ9HCN3 771 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 RCOR1Q9UKL0 485 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 SPEGQ15772 3267 aa13.06□□□□□ -0.32
COPS7A-211ENST00000540408 GOLGA8CPA6NN73 597 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 STX10O60499 249 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 ZBED1O96006 694 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 DNTTP04053 509 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 ATP5BP06576 529 aaKnown RBP13.05□□□□□ -0.32
COPS7A-211ENST00000540408 TRIM49P0CI25 452 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 TRIM49CP0CI26 452 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 PRKCHP24723 683 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 GTF2H1P32780 548 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 TKTL1P51854 596 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 ZBTB16Q05516 673 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 PPP3CAQ08209 521 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 PDE4CQ08493 712 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 ADAM9Q13443 819 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 CAMK2GQ13555 558 aaPredicted RBP13.05□□□□□ -0.32
COPS7A-211ENST00000540408 NFIL3Q16649 462 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 COL28A1Q2UY09 1125 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 DBX2Q6ZNG2 339 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 PDZD3Q86UT5 571 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 ANKRD52Q8NB46 1076 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 MDM1Q8TC05 714 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 SORCS1Q8WY21 1168 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 TMA16Q96EY4 203 aaKnown RBP13.05□□□□□ -0.32
COPS7A-211ENST00000540408 IPO9Q96P70 1041 aaKnown RBP13.05□□□□□ -0.32
COPS7A-211ENST00000540408 ARID3AQ99856 593 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 BTBD1Q9H0C5 482 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 LRRC4Q9HBW1 653 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 CISHQ9NSE2 258 aa13.05□□□□□ -0.32
COPS7A-211ENST00000540408 FNDC3AQ9Y2H6 1198 aaKnown RBP13.05□□□□□ -0.32
COPS7A-211ENST00000540408 HBS1LQ9Y450 684 aaKnown RBP13.05□□□□□ -0.32
COPS7A-211ENST00000540408 EIF4E1BA6NMX2 242 aaKnown RBP13.04□□□□□ -0.32
COPS7A-211ENST00000540408 TSPAN3O60637 253 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 HLA-EP13747 358 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 GRK6P43250 576 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 SFSWAPQ12872 951 aaKnown RBP13.04□□□□□ -0.32
COPS7A-211ENST00000540408 TRIP4Q15650 581 aaPredicted RBP13.04□□□□□ -0.32
COPS7A-211ENST00000540408 INAVAQ3KP66 663 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 TTC31Q49AM3 519 aaPredicted RBP13.04□□□□□ -0.32
COPS7A-211ENST00000540408 RAB41Q5JT25 222 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 TMEM215Q68D42 235 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 ARHGAP17Q68EM7 881 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 CHST9Q7L1S5 443 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 ADAT2Q7Z6V5 191 aaKnown RBP13.04□□□□□ -0.32
COPS7A-211ENST00000540408 FMNL3Q8IVF7 1028 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 FAM217AQ8IXS0 508 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 FBXL13Q8NEE6 735 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 C1orf216Q8TAB5 229 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 HNRNPLLQ8WVV9 542 aaKnown RBP13.04□□□□□ -0.32
COPS7A-211ENST00000540408 GOLGA1Q92805 767 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 SKA1Q96BD8 255 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 P2RY11Q96G91 374 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 OSGEPQ9NPF4 335 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 RAB20Q9NX57 234 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 HESX1Q9UBX0 185 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 SUN2Q9UH99 717 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 CLEC4EQ9ULY5 219 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.04□□□□□ -0.32
COPS7A-211ENST00000540408 MAPK8IP1Q9UQF2 711 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 NCKAP1Q9Y2A7 1128 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 ANKRD6Q9Y2G4 727 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.04□□□□□ -0.32
COPS7A-211ENST00000540408 BAHCC1Q9P281 2608 aa13.04□□□□□ -0.32
COPS7A-211ENST00000540408 WDFY3Q8IZQ1 3526 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 A0A1B0GVL5 298 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 TNFSF14O43557 240 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 DFNA5O60443 496 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 RHOBTB3O94955 611 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 SEMA4FO95754 770 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 LATS1O95835 1130 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 ATXN1LP0C7T5 689 aaKnown RBP13.03□□□□□ -0.32
COPS7A-211ENST00000540408 PFKFB1P16118 471 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 CMA1P23946 247 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 ACSL1P33121 698 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 GRIA4P48058 902 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 BCAT1P54687 386 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 RAD23BP54727 409 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 BNC1Q01954 994 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 DNM1Q05193 864 aaKnown RBP13.03□□□□□ -0.32
COPS7A-211ENST00000540408 KIF19Q2TAC6 998 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 ADGRF1Q5T601 910 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 PM20D1Q6GTS8 502 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 AHI1Q8N157 1196 aa13.03□□□□□ -0.32
COPS7A-211ENST00000540408 GUF1Q8N442 669 aaKnown RBP13.03□□□□□ -0.32
COPS7A-211ENST00000540408 ZNF557Q8N988 423 aaPredicted RBP13.03□□□□□ -0.32
COPS7A-211ENST00000540408 SLC4A11Q8NBS3 891 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms