RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 THRAP10827 490 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 DEFA1P59665 94 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 DEFA3P59666 94 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 YWHAHQ04917 246 aaPredicted RBP11.38□□□□□ -0.59
PBX1-212ENST00000540236 EIF1ADQ8N9N8 165 aaKnown RBP11.38□□□□□ -0.59
PBX1-212ENST00000540236 ALKBH8Q96BT7 664 aaKnown RBP11.38□□□□□ -0.59
PBX1-212ENST00000540236 PNMA5Q96PV4 448 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 PCDHAC1Q9H158 963 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 ELOVL6Q9H5J4 265 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 WDR55Q9H6Y2 383 aaPredicted RBP11.38□□□□□ -0.59
PBX1-212ENST00000540236 MAGEE1Q9HCI5 957 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 EXOSC4Q9NPD3 245 aaKnown RBP11.38□□□□□ -0.59
PBX1-212ENST00000540236 AFG3L2Q9Y4W6 797 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 MAP3K15Q6ZN16 1313 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 OVOS2A0A0J9YW53 1432 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 OVOS2Q6IE36 1432 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 PTPRUQ92729 1446 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 DLG5Q8TDM6 1919 aa11.38□□□□□ -0.59
PBX1-212ENST00000540236 LOC100506127A0A0U1RQW1 187 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 GARTP22102 1010 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 CCND2P30279 289 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 GAD2Q05329 585 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 ORC1Q13415 861 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 PPP1R3AQ16821 1122 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 PABPC1LQ4VXU2 614 aaKnown RBP11.37□□□□□ -0.59
PBX1-212ENST00000540236 KLHL17Q6TDP4 642 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 CRTC3Q6UUV7 619 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 FRA10AC1Q70Z53 315 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 FNIP1Q8TF40 1166 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 SLC9A2Q9UBY0 812 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 NR5A2O00482 541 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 GPSM2P81274 684 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 LRRC49Q8IUZ0 686 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 ZCCHC9Q8N567 271 aaKnown RBP11.37□□□□□ -0.59
PBX1-212ENST00000540236 GRIN3AQ8TCU5 1115 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 TMEM47Q9BQJ4 181 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 CD163L1Q9NR16 1453 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 TBX1O43435 398 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 VAPBO95292 243 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 SERPINA6P08185 405 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 ZNF37AP17032 561 aaPredicted RBP11.37□□□□□ -0.59
PBX1-212ENST00000540236 MYBPC1Q00872 1141 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 MSLNQ13421 630 aaPredicted RBP11.37□□□□□ -0.59
PBX1-212ENST00000540236 ZNF267Q14586 743 aaPredicted RBP11.37□□□□□ -0.59
PBX1-212ENST00000540236 FAM47CQ5HY64 1035 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 AARS2Q5JTZ9 985 aaKnown RBP11.37□□□□□ -0.59
PBX1-212ENST00000540236 LRRC55Q6ZSA7 311 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 RFPL4BQ6ZWI9 263 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 ZBTB33Q86T24 672 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 OR8H3Q8N146 312 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 CCDC167Q9P0B6 97 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 SYNPO2Q9UMS6 1093 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 FMO4P31512 558 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 KRT6CP48668 564 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 CYP4F2P78329 520 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 TNFAIP2Q03169 654 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 FPGSQ05932 587 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 CYP4F3Q08477 520 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 EMC10Q5UCC4 262 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 IL23RQ5VWK5 629 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 SEL1L3Q68CR1 1132 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 FBXL20Q96IG2 436 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 VPS39Q96JC1 886 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 CYP4F12Q9HCS2 524 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 HPS4Q9NQG7 708 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 SH3GLB2Q9NR46 395 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.37□□□□□ -0.59
PBX1-212ENST00000540236 GGA1Q9UJY5 639 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 STXBP5LQ9Y2K9 1186 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 PCDHGA7Q9Y5G6 932 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 MROH5Q6ZUA9 1318 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 EPHA3P29320 983 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 SLC9A3P48764 834 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 DGUOKQ16854 277 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 NPNTQ6UXI9 565 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 C10orf107Q8IVU9 208 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 ROGDIQ9GZN7 287 aa11.37□□□□□ -0.59
PBX1-212ENST00000540236 MRPL47Q9HD33 250 aaKnown RBP11.37□□□□□ -0.59
PBX1-212ENST00000540236 CST8O60676 142 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 GRAP2O75791 330 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 ERCC2P18074 760 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 NDST2P52849 883 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 CD83Q01151 205 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 IL5RAQ01344 420 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 BTG3Q14201 252 aaPredicted RBP11.36□□□□□ -0.59
PBX1-212ENST00000540236 RABL6Q3YEC7 729 aaPredicted RBP11.36□□□□□ -0.59
PBX1-212ENST00000540236 HERC6Q8IVU3 1022 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 SLFN12Q8IYM2 578 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 SPATA6LQ8N4H0 392 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 C7orf57Q8NEG2 295 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 TNIP2Q8NFZ5 429 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 ZNF577Q9BSK1 485 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 TMEM206Q9H813 350 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 PCDHA3Q9Y5H8 950 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 METP08581 1390 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 SF3B1O75533 1304 aaKnown RBP eCLIP11.36□□□□□ -0.59
PBX1-212ENST00000540236 A0A1B0GTW7 788 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 F8W8V4 182 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 FSCN2O14926 492 aa11.36□□□□□ -0.59
PBX1-212ENST00000540236 NCAM1P13591 858 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms