RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 SPDYCQ5MJ68 293 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 BRMS1LQ5PSV4 323 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 ALS2CLQ60I27 953 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 TPGS2Q68CL5 300 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 MSANTD2Q6P1R3 559 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 OTOP2Q7RTS6 562 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 TTC9BQ8N6N2 239 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 ADAM32Q8TC27 787 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 FBXO25Q8TCJ0 367 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 RNF139Q8WU17 664 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 WDCPQ9H6R7 721 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 SAE1Q9UBE0 346 aaPredicted RBP17.48■□□□□ 0.39
COPS3-212ENST00000539941 AFF4Q9UHB7 1163 aaKnown RBP17.48■□□□□ 0.39
COPS3-212ENST00000539941 PTPRSQ13332 1948 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 A0A1W2PQH9 124 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 WDR27A2RRH5 827 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 CFAP69A5D8W1 941 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 SGK1O00141 431 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 IRAK2O43187 625 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 STIP1P31948 543 aaKnown RBP17.48■□□□□ 0.39
COPS3-212ENST00000539941 OR1D2P34982 312 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 HCAR3P49019 387 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 HTRA4P83105 476 aaPredicted RBP17.48■□□□□ 0.39
COPS3-212ENST00000539941 DUSP4Q13115 394 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 SEMA3BQ13214 749 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 XRCC4Q13426 336 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 PSRC1Q6PGN9 363 aaPredicted RBP17.48■□□□□ 0.39
COPS3-212ENST00000539941 BZW1Q7L1Q6 419 aaKnown RBP17.48■□□□□ 0.39
COPS3-212ENST00000539941 C16orf59Q7L2K0 433 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 TMCO2Q7Z6W1 182 aaPredicted RBP17.48■□□□□ 0.39
COPS3-212ENST00000539941 RSAD2Q8WXG1 361 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 SEPT5Q99719 369 aaPredicted RBP17.48■□□□□ 0.39
COPS3-212ENST00000539941 TMEM121Q9BTD3 319 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 CLIC5Q9NZA1 410 aa17.48■□□□□ 0.39
COPS3-212ENST00000539941 GJB5O95377 273 aa17.47■□□□□ 0.39
COPS3-212ENST00000539941 URODP06132 367 aa17.47■□□□□ 0.39
COPS3-212ENST00000539941 GOT1P17174 413 aa17.47■□□□□ 0.39
COPS3-212ENST00000539941 SDHAF4Q5VUM1 108 aa17.47■□□□□ 0.39
COPS3-212ENST00000539941 TMC3Q7Z5M5 1100 aa17.47■□□□□ 0.39
COPS3-212ENST00000539941 SPATS2Q86XZ4 545 aaKnown RBP17.47■□□□□ 0.39
COPS3-212ENST00000539941 PYROXD2Q8N2H3 581 aa17.47■□□□□ 0.39
COPS3-212ENST00000539941 SERPINB11Q96P15 392 aa17.47■□□□□ 0.39
COPS3-212ENST00000539941 FOXP3Q9BZS1 431 aa17.47■□□□□ 0.39
COPS3-212ENST00000539941 CRISPLD1Q9H336 500 aa17.47■□□□□ 0.39
COPS3-212ENST00000539941 NMUR1Q9HB89 426 aa17.47■□□□□ 0.39
COPS3-212ENST00000539941 SUFUQ9UMX1 484 aa17.47■□□□□ 0.39
COPS3-212ENST00000539941 SLC27A5Q9Y2P5 690 aa17.47■□□□□ 0.39
COPS3-212ENST00000539941 PCDHB12Q9Y5F1 795 aa17.47■□□□□ 0.39
COPS3-212ENST00000539941 GREB1Q4ZG55 1949 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 ZBBXA8MT70 800 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 EEF2KO00418 725 aaKnown RBP17.46■□□□□ 0.39
COPS3-212ENST00000539941 SOX1O00570 391 aaPredicted RBP17.46■□□□□ 0.39
COPS3-212ENST00000539941 PPFIA2O75334 1257 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 ABLIM3O94929 683 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 USP46P62068 366 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 CREMQ03060 361 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 PPP2R5DQ14738 602 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 TRIP13Q15645 432 aaPredicted RBP17.46■□□□□ 0.39
COPS3-212ENST00000539941 RHBDF2Q6PJF5 856 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 NPNTQ6UXI9 565 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 ZNF461Q8TAF7 563 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 BADQ92934 168 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 FBXO32Q969P5 355 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 CLSTN3Q9BQT9 956 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 TTLL2Q9BWV7 592 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 TXLNGYQ9BZA5 131 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 TKTL2Q9H0I9 626 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 OSBPL2Q9H1P3 480 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 ARHGEF4Q9NR80 690 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 TLR8Q9NR97 1041 aaKnown RBP17.46■□□□□ 0.39
COPS3-212ENST00000539941 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.46■□□□□ 0.39
COPS3-212ENST00000539941 OLA1Q9NTK5 396 aaKnown RBP17.46■□□□□ 0.39
COPS3-212ENST00000539941 ARHGEF38Q9NXL2 777 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 MAFFQ9ULX9 164 aa17.46■□□□□ 0.39
COPS3-212ENST00000539941 ZNF638Q14966 1978 aaKnown RBP17.46■□□□□ 0.39
COPS3-212ENST00000539941 BCLAF3A2AJT9 711 aaKnown RBP17.45■□□□□ 0.38
COPS3-212ENST00000539941 ADAM12O43184 909 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 ZNF189O75820 626 aaPredicted RBP17.45■□□□□ 0.38
COPS3-212ENST00000539941 HTR7P34969 479 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 DHX9Q08211 1270 aaKnown RBP17.45■□□□□ 0.38
COPS3-212ENST00000539941 DPYSQ14117 519 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 SLMAPQ14BN4 828 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 DARS2Q6PI48 645 aaKnown RBP17.45■□□□□ 0.38
COPS3-212ENST00000539941 C1orf228Q6PIY5 440 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 CEP128Q6ZU80 1094 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 RFX8Q6ZV50 586 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 CDKL3Q8IVW4 592 aaPredicted RBP17.45■□□□□ 0.38
COPS3-212ENST00000539941 MICALL1Q8N3F8 863 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 FIBCD1Q8N539 461 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 TSEN2Q8NCE0 465 aaKnown RBP17.45■□□□□ 0.38
COPS3-212ENST00000539941 RNF34Q969K3 372 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 RTP4Q96DX8 246 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 HAPLN3Q96S86 360 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 EPAS1Q99814 870 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 MAGEB5Q9BZ81 275 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 UBE2OQ9C0C9 1292 aaKnown RBP17.45■□□□□ 0.38
COPS3-212ENST00000539941 GMIPQ9P107 970 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 ANAPC5Q9UJX4 755 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 INSL6Q9Y581 213 aa17.45■□□□□ 0.38
COPS3-212ENST00000539941 HEY1Q9Y5J3 304 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms