RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 RIOX1Q9H6W3 641 aa7.5□□□□□ -1.21
TRAV11-201ENST00000539512 TMLHEQ9NVH6 421 aa7.5□□□□□ -1.21
TRAV11-201ENST00000539512 FZD4Q9ULV1 537 aa7.5□□□□□ -1.21
TRAV11-201ENST00000539512 FAM90A18PA6NE21 464 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 FAM90A16PA6NEW6 464 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 FAM90A9PA6NNJ1 464 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 FAM90A5PA8MXJ8 464 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 BTBD19C9JJ37 291 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 FYB1O15117 783 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 FAM90A15PP0C7V4 464 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 FAM90A14PP0C7W9 464 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 APEHP13798 732 aaKnown RBP7.49□□□□□ -1.21
TRAV11-201ENST00000539512 DUSP1P28562 367 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 MAPK9P45984 424 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 MCM2P49736 904 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 PNLIPRP1P54315 467 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 WDR5P61964 334 aaKnown RBP7.49□□□□□ -1.21
TRAV11-201ENST00000539512 MOGAT3Q86VF5 341 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 SRFBP1Q8NEF9 429 aaKnown RBP7.49□□□□□ -1.21
TRAV11-201ENST00000539512 ADAMTS18Q8TE60 1221 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 GLMPQ8WWB7 406 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 CHFRQ96EP1 664 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 MCRS1Q96EZ8 462 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 PRR11Q96HE9 360 aaPredicted RBP7.49□□□□□ -1.21
TRAV11-201ENST00000539512 HIC2Q96JB3 615 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 ABHD10Q9NUJ1 306 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 RAB21Q9UL25 225 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 TRPC5Q9UL62 973 aaPredicted RBP7.49□□□□□ -1.21
TRAV11-201ENST00000539512 ZBTB1Q9Y2K1 713 aa7.49□□□□□ -1.21
TRAV11-201ENST00000539512 CCDC189A1A4V9 331 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 E7EVH7 732 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 CLIC1O00299 241 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 ZNF213O14771 459 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 NKX2-8O15522 239 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 RNF8O76064 485 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 ALDOAP04075 364 aaKnown RBP7.48□□□□□ -1.21
TRAV11-201ENST00000539512 PCP4P48539 62 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 RBM5P52756 815 aaKnown RBP eCLIP7.48□□□□□ -1.21
TRAV11-201ENST00000539512 ACTR2P61160 394 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 RBM6P78332 1123 aaKnown RBP7.48□□□□□ -1.21
TRAV11-201ENST00000539512 CUL4BQ13620 913 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 TTC22Q5TAA0 569 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 SPPL3Q8TCT6 385 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 NPIPB3Q92617 1050 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 AKAP1Q92667 903 aaKnown RBP eCLIP7.48□□□□□ -1.21
TRAV11-201ENST00000539512 NELL1Q92832 810 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 SDCCAG3Q96C92 435 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 PYM1Q9BRP8 204 aaKnown RBP7.48□□□□□ -1.21
TRAV11-201ENST00000539512 TRIM2Q9C040 744 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 IKZF4Q9H2S9 585 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 CDCP1Q9H5V8 836 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 KCNK9Q9NPC2 374 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 ARL8BQ9NVJ2 186 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 GPR52Q9Y2T5 361 aa7.48□□□□□ -1.21
TRAV11-201ENST00000539512 SLC38A8A6NNN8 435 aa7.47□□□□□ -1.21
TRAV11-201ENST00000539512 POC1B-GALNT4F8VUJ3 575 aa7.47□□□□□ -1.21
TRAV11-201ENST00000539512 NUDT3O95989 172 aa7.47□□□□□ -1.21
TRAV11-201ENST00000539512 RXRAP19793 462 aa7.47□□□□□ -1.21
TRAV11-201ENST00000539512 ITPKBP27987 946 aa7.47□□□□□ -1.21
TRAV11-201ENST00000539512 CDK7P50613 346 aa7.47□□□□□ -1.21
TRAV11-201ENST00000539512 PRKAA2P54646 552 aa7.47□□□□□ -1.21
TRAV11-201ENST00000539512 ELLP55199 621 aaPredicted RBP7.47□□□□□ -1.21
TRAV11-201ENST00000539512 PFKFB3Q16875 520 aaPredicted RBP7.47□□□□□ -1.21
TRAV11-201ENST00000539512 DGAT2L7PQ6IED9 249 aa7.47□□□□□ -1.21
TRAV11-201ENST00000539512 SYNE3Q6ZMZ3 975 aa7.47□□□□□ -1.21
TRAV11-201ENST00000539512 GALNT4Q8N4A0 578 aa7.47□□□□□ -1.21
TRAV11-201ENST00000539512 TMEM57Q8N5G2 664 aa7.47□□□□□ -1.21
TRAV11-201ENST00000539512 PNLDC1Q8NA58 520 aaKnown RBP7.47□□□□□ -1.21
TRAV11-201ENST00000539512 ADPRHL1Q8NDY3 354 aa7.47□□□□□ -1.21
TRAV11-201ENST00000539512 CSGALNACT1Q8TDX6 532 aa7.47□□□□□ -1.21
TRAV11-201ENST00000539512 MECRQ9BV79 373 aa7.47□□□□□ -1.21
TRAV11-201ENST00000539512 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.47□□□□□ -1.21
TRAV11-201ENST00000539512 GTF2A1LQ9UNN4 478 aa7.47□□□□□ -1.21
TRAV11-201ENST00000539512 SLC12A4Q9UP95 1085 aa7.47□□□□□ -1.21
TRAV11-201ENST00000539512 HEMK1Q9Y5R4 338 aaPredicted RBP7.47□□□□□ -1.21
TRAV11-201ENST00000539512 C3orf70A6NLC5 250 aaPredicted RBP7.46□□□□□ -1.22
TRAV11-201ENST00000539512 TMEM232C9JQI7 657 aa7.46□□□□□ -1.22
TRAV11-201ENST00000539512 SEPT4O43236 478 aa7.46□□□□□ -1.22
TRAV11-201ENST00000539512 CHRM5P08912 532 aaPredicted RBP7.46□□□□□ -1.22
TRAV11-201ENST00000539512 VPS41P49754 854 aa7.46□□□□□ -1.22
TRAV11-201ENST00000539512 TLE3Q04726 772 aa7.46□□□□□ -1.22
TRAV11-201ENST00000539512 LARS2Q15031 903 aaKnown RBP7.46□□□□□ -1.22
TRAV11-201ENST00000539512 GALNTL6Q49A17 601 aa7.46□□□□□ -1.22
TRAV11-201ENST00000539512 GLE1Q53GS7 698 aaKnown RBP7.46□□□□□ -1.22
TRAV11-201ENST00000539512 FBXO47Q5MNV8 452 aa7.46□□□□□ -1.22
TRAV11-201ENST00000539512 C16orf89Q6UX73 402 aa7.46□□□□□ -1.22
TRAV11-201ENST00000539512 SYT13Q7L8C5 426 aa7.46□□□□□ -1.22
TRAV11-201ENST00000539512 LINC01465Q8N7H1 131 aa7.46□□□□□ -1.22
TRAV11-201ENST00000539512 PIGSQ96S52 555 aa7.46□□□□□ -1.22
TRAV11-201ENST00000539512 PRDM16Q9HAZ2 1276 aa7.46□□□□□ -1.22
TRAV11-201ENST00000539512 SEMA4GQ9NTN9 838 aa7.46□□□□□ -1.22
TRAV11-201ENST00000539512 KCND3Q9UK17 655 aa7.46□□□□□ -1.22
TRAV11-201ENST00000539512 LOC105369274A0A096LPK9 316 aa7.45□□□□□ -1.22
TRAV11-201ENST00000539512 LOC102723532A0A0G2JNH3 316 aa7.45□□□□□ -1.22
TRAV11-201ENST00000539512 MBD3L5A6NJ08 208 aaPredicted RBP7.45□□□□□ -1.22
TRAV11-201ENST00000539512 M0QYT0 321 aa7.45□□□□□ -1.22
TRAV11-201ENST00000539512 EIF3FO00303 357 aaPredicted RBP7.45□□□□□ -1.22
TRAV11-201ENST00000539512 FAM155BO75949 473 aa7.45□□□□□ -1.22
TRAV11-201ENST00000539512 TAS2R50P59544 299 aa7.45□□□□□ -1.22
TRAV11-201ENST00000539512 RPL15P61313 204 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms