RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 URODP06132 367 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 CA3P07451 260 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 CD48P09326 243 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 FAM153BP0C7A2 387 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 CPB1P15086 417 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 RPL17P18621 184 aaKnown RBP9.17□□□□□ -0.94
DDB1-213ENST00000539332 BDNFP23560 247 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 CTNNB1P35222 781 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 MAGEA11P43364 429 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 RPL21P46778 160 aaKnown RBP9.17□□□□□ -0.94
DDB1-213ENST00000539332 KCNJ1P48048 391 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 NDUFV1P49821 464 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 VCPP55072 806 aaKnown RBP9.17□□□□□ -0.94
DDB1-213ENST00000539332 ARPP19P56211 112 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 YWHAZP63104 245 aaKnown RBP9.17□□□□□ -0.94
DDB1-213ENST00000539332 ATP11AP98196 1134 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 GUCY1A3Q02108 690 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 GPR17Q13304 367 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 LLGL1Q15334 1064 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 DPYSL2Q16555 572 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 CDO1Q16878 200 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 FAM153CQ494X1 144 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 ANKRD20A8PQ5CZ79 823 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 KCNT1Q5JUK3 1230 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 ZFYVE27Q5T4F4 411 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 TTC19Q6DKK2 380 aaPredicted RBP9.17□□□□□ -0.94
DDB1-213ENST00000539332 ZDHHC24Q6UX98 284 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 SPRED2Q7Z698 418 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 DDX42Q86XP3 938 aaKnown RBP eCLIP9.17□□□□□ -0.94
DDB1-213ENST00000539332 DEFB106AQ8N104 65 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 TTC13Q8NBP0 860 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 FBXO22Q8NEZ5 403 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 CENPTQ96BT3 561 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 PGLYRP2Q96PD5 576 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 ZNF670Q9BS34 389 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 C17orf80Q9BSJ5 609 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 TXLNGYQ9BZA5 131 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 POPDC2Q9HBU9 364 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 PCDH18Q9HCL0 1135 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 CD248Q9HCU0 757 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 ABI2Q9NYB9 513 aaPredicted RBP9.17□□□□□ -0.94
DDB1-213ENST00000539332 RRN3Q9NYV6 651 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 FAM153AQ9UHL3 310 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 DRG1Q9Y295 367 aaKnown RBP9.17□□□□□ -0.94
DDB1-213ENST00000539332 RWDD3Q9Y3V2 267 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 MTCL1Q9Y4B5 1905 aaKnown RBP9.17□□□□□ -0.94
DDB1-213ENST00000539332 NUP205Q92621 2012 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 YJEFN3A6XGL0 299 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 E7ENQ6 273 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 APOC4-APOC2K7ER74 178 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 TP73O15350 636 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 VNN2O95498 520 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 GAS8O95995 478 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 ZBED1O96006 694 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 KRT14P02533 472 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 APOC2P02655 101 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 LTFP02788 710 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 ITGAVP06756 1048 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 IL4RP24394 825 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 CYP2F1P24903 491 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 DNAJB2P25686 324 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 OR1D2P34982 312 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 ROR1Q01973 937 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 ODF2Q5BJF6 829 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 ERMARDQ5T6L9 678 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 KCTD16Q68DU8 428 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 HFE2Q6ZVN8 426 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 CROCCP2Q86T23 111 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 GPR65Q8IYL9 337 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 SH2D3CQ8N5H7 860 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 ATAD1Q8NBU5 361 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 KCTD6Q8NC69 237 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 AUTS2Q8WXX7 1259 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 IFT81Q8WYA0 676 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 NDRG1Q92597 394 aaKnown RBP9.17□□□□□ -0.94
DDB1-213ENST00000539332 HSPH1Q92598 858 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 FAM149B1Q96BN6 582 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 CLSTN3Q9BQT9 956 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 ZBP1Q9H171 429 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 ALG13Q9NP73 1137 aaKnown RBP9.17□□□□□ -0.94
DDB1-213ENST00000539332 MRPL17Q9NRX2 175 aaKnown RBP9.17□□□□□ -0.94
DDB1-213ENST00000539332 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.17□□□□□ -0.94
DDB1-213ENST00000539332 MTMR10Q9NXD2 777 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 RCOR3Q9P2K3 495 aaPredicted RBP9.17□□□□□ -0.94
DDB1-213ENST00000539332 DNPEPQ9ULA0 475 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 STAP1Q9ULZ2 295 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 PCDHB5Q9Y5E4 795 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 PCDHA11Q9Y5I1 949 aa9.17□□□□□ -0.94
DDB1-213ENST00000539332 WDR27A2RRH5 827 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 MTMR11A4FU01 709 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 CFAP73A6NFT4 308 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 C5orf67F2Z3F1 127 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 SH3BP5O60239 455 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 MGRN1O60291 552 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 CST8O60676 142 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 LILRB3O75022 631 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 CTSAP10619 480 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 KLRC2P26717 231 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 L1CAMP32004 1257 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 PBX2P40425 430 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms