RNA–Protein interactions for RNA: ENST00000538689.4

FDFT1-222, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 2,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-222ENST00000538689 TTC3P53804 2025 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 NBNO60934 754 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 DDHD2O94830 711 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 TTC4O95801 387 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 ZSCAN5DPP0CG00 497 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 RBP3P10745 1247 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 ETS1P14921 441 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 ATXN1P54253 815 aaKnown RBP7.3□□□□□ -1.24
FDFT1-222ENST00000538689 GDF10P55107 478 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 DAOAP59103 153 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 RAB33AQ14088 237 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 GPNMBQ14956 572 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 CA9Q16790 459 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 KCTD16Q68DU8 428 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 CEP128Q6ZU80 1094 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 PCGF5Q86SE9 256 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 CROCCP2Q86T23 111 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 CCDC25Q86WR0 208 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 COLGALT2Q8IYK4 626 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 THEM5Q8N1Q8 247 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 SCML4Q8N228 414 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 URGCPQ8TCY9 931 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.3□□□□□ -1.24
FDFT1-222ENST00000538689 RSAD2Q8WXG1 361 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 MYLPFQ96A32 169 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 NPY6RQ99463 290 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 TMEM109Q9BVC6 243 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 ULBP1Q9BZM6 244 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 CDC42EP4Q9H3Q1 356 aaKnown RBP7.3□□□□□ -1.24
FDFT1-222ENST00000538689 C12orf49Q9H741 205 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 TBC1D13Q9NVG8 400 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.3□□□□□ -1.24
FDFT1-222ENST00000538689 AP4E1Q9UPM8 1137 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 SHOC2Q9UQ13 582 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 PTPRDP23468 1912 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 A6NNZ2 444 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 YJEFN3A6XGL0 299 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 E7ENQ6 273 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 F8W810 466 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 NRP1O14786 923 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 APOL1O14791 398 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 B4GALT3O60512 393 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 SHOX2O60902 331 aaPredicted RBP7.3□□□□□ -1.24
FDFT1-222ENST00000538689 OAZ2O95190 189 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 ZBED1O96006 694 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 PDGFAP04085 211 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 SHBGP04278 402 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 FYNP06241 537 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 BDNFP23560 247 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 CDR1P51861 262 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 TSPY1Q01534 308 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 YWHAHQ04917 246 aaPredicted RBP7.3□□□□□ -1.24
FDFT1-222ENST00000538689 KRT71Q3SY84 523 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 TUBB8Q3ZCM7 444 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 PPP6R3Q5H9R7 873 aaPredicted RBP7.3□□□□□ -1.24
FDFT1-222ENST00000538689 RNASEH2BQ5TBB1 312 aaKnown RBP7.3□□□□□ -1.24
FDFT1-222ENST00000538689 AGBL2Q5U5Z8 902 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 OTUD1Q5VV17 481 aaPredicted RBP7.3□□□□□ -1.24
FDFT1-222ENST00000538689 SYPL2Q5VXT5 272 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 PM20D1Q6GTS8 502 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 SLC39A5Q6ZMH5 540 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 HFE2Q6ZVN8 426 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 ERMP1Q7Z2K6 904 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 GPRIN1Q7Z2K8 1008 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 LRRTM3Q86VH5 581 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 HOOK3Q86VS8 718 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 UNC45BQ8IWX7 931 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 ETFBKMTQ8IXQ9 262 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 SH2D3CQ8N5H7 860 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 CCDC185Q8N715 623 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 OR10T2Q8NGX3 314 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 PGM2Q96G03 612 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 RBM15Q96T37 977 aaKnown RBP eCLIP7.3□□□□□ -1.242e-7■■■■□ 21.8
FDFT1-222ENST00000538689 C2orf49Q9BVC5 232 aaPredicted RBP7.3□□□□□ -1.24
FDFT1-222ENST00000538689 DHX35Q9H5Z1 703 aaKnown RBP7.3□□□□□ -1.24
FDFT1-222ENST00000538689 C11orf49Q9H6J7 331 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 NRDE2Q9H7Z3 1164 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 PNPLA8Q9NP80 782 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 RRN3Q9NYV6 651 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 RCOR3Q9P2K3 495 aaPredicted RBP7.3□□□□□ -1.24
FDFT1-222ENST00000538689 FZD10Q9ULW2 581 aa7.3□□□□□ -1.24
FDFT1-222ENST00000538689 CEP290O15078 2479 aa7.29□□□□□ -1.24
FDFT1-222ENST00000538689 A6NHS1 94 aa7.29□□□□□ -1.24
FDFT1-222ENST00000538689 M0QYT0 321 aa7.29□□□□□ -1.24
FDFT1-222ENST00000538689 TRAPPC3O43617 180 aa7.29□□□□□ -1.24
FDFT1-222ENST00000538689 LTFP02788 710 aa7.29□□□□□ -1.24
FDFT1-222ENST00000538689 USP17L7P0C7H9 530 aa7.29□□□□□ -1.24
FDFT1-222ENST00000538689 ZFXP17010 805 aaPredicted RBP7.29□□□□□ -1.24
FDFT1-222ENST00000538689 CYP2F1P24903 491 aa7.29□□□□□ -1.24
FDFT1-222ENST00000538689 RDXP35241 583 aaKnown RBP7.29□□□□□ -1.24
FDFT1-222ENST00000538689 IRS1P35568 1242 aa7.29□□□□□ -1.24
FDFT1-222ENST00000538689 NR2C2P49116 596 aa7.29□□□□□ -1.24
FDFT1-222ENST00000538689 LMAN1P49257 510 aa7.29□□□□□ -1.24
FDFT1-222ENST00000538689 SULT1E1P49888 294 aa7.29□□□□□ -1.24
FDFT1-222ENST00000538689 AIF1P55008 147 aa7.29□□□□□ -1.24
FDFT1-222ENST00000538689 BCAR1P56945 870 aa7.29□□□□□ -1.24
FDFT1-222ENST00000538689 SKOR1P84550 965 aa7.29□□□□□ -1.24
FDFT1-222ENST00000538689 ROR1Q01973 937 aa7.29□□□□□ -1.24
FDFT1-222ENST00000538689 RNASELQ05823 741 aaKnown RBP7.29□□□□□ -1.24
FDFT1-222ENST00000538689 BIRC2Q13490 618 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms