RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 A0A1B0GVM2 712 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 K7ENM7 598 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 SDC3O75056 442 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 PLCG1P19174 1290 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 ATP5C1P36542 298 aaKnown RBP9.65□□□□□ -0.86
USP28-205ENST00000537706 NUDT1P36639 197 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 HARS2P49590 506 aaKnown RBP9.65□□□□□ -0.86
USP28-205ENST00000537706 GALCP54803 685 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 RAD51AP2Q09MP3 1159 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 KCNAB2Q13303 367 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 ECM1Q16610 540 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 NCEH1Q6PIU2 408 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 IQCHQ86VS3 1027 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 TICAM1Q8IUC6 712 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 WDR48Q8TAF3 677 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 WFIKKN2Q8TEU8 576 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 PCED1BQ96HM7 432 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 DUSP23Q9BVJ7 150 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 SLC2A11Q9BYW1 496 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 PABPC3Q9H361 631 aaKnown RBP9.65□□□□□ -0.86
USP28-205ENST00000537706 CRTAC1Q9NQ79 661 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 PCDHB11Q9Y5F2 797 aa9.65□□□□□ -0.86
USP28-205ENST00000537706 NEMP2A6NFY4 417 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 TLR5O60602 858 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 PDGFRBP09619 1106 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 PLA2G4AP47712 749 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 FXR2P51116 673 aaKnown RBP eCLIP9.64□□□□□ -0.87
USP28-205ENST00000537706 POSTNQ15063 836 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 BORAQ6PGQ7 559 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 TADA2BQ86TJ2 420 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 PRPF39Q86UA1 669 aaKnown RBP9.64□□□□□ -0.87
USP28-205ENST00000537706 IFI44Q8TCB0 444 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 KCNN1Q92952 543 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 WBP2Q969T9 261 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 OMDQ99983 421 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 KLF16Q9BXK1 252 aaPredicted RBP9.64□□□□□ -0.87
USP28-205ENST00000537706 TLR8Q9NR97 1041 aaKnown RBP9.64□□□□□ -0.87
USP28-205ENST00000537706 GJB4Q9NTQ9 266 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 FBXL12Q9NXK8 326 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 PCDHGA7Q9Y5G6 932 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 DOPEY1Q5JWR5 2465 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 A0A087X0B3 334 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 FFAR2O15552 330 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 HCRTO43612 131 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 TCEA3O75764 348 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 PENKP01210 267 aaPredicted RBP9.64□□□□□ -0.87
USP28-205ENST00000537706 C7P10643 843 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 LIPCP11150 499 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 WARSP23381 471 aaKnown RBP9.64□□□□□ -0.87
USP28-205ENST00000537706 PDE4CQ08493 712 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 STAT4Q14765 748 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 SOWAHAQ2M3V2 549 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 DSG4Q86SJ6 1040 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 DIS3L2Q8IYB7 885 aaKnown RBP9.64□□□□□ -0.87
USP28-205ENST00000537706 KCNB2Q92953 911 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 PRR11Q96HE9 360 aaPredicted RBP9.64□□□□□ -0.87
USP28-205ENST00000537706 DCLK3Q9C098 648 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 PLAAQ9Y263 795 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 PCDHGA4Q9Y5G9 962 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 ENTPD2Q9Y5L3 495 aa9.64□□□□□ -0.87
USP28-205ENST00000537706 TMX2-CTNND1H3BSU7 103 aa9.63□□□□□ -0.87
USP28-205ENST00000537706 TMEM191BP0C7N4 346 aa9.63□□□□□ -0.87
USP28-205ENST00000537706 LMO2P25791 158 aa9.63□□□□□ -0.87
USP28-205ENST00000537706 SLC5A2P31639 672 aa9.63□□□□□ -0.87
USP28-205ENST00000537706 EIF3IQ13347 325 aaKnown RBP9.63□□□□□ -0.87
USP28-205ENST00000537706 GNL2Q13823 731 aaKnown RBP9.63□□□□□ -0.87
USP28-205ENST00000537706 NAA30Q147X3 362 aaPredicted RBP9.63□□□□□ -0.87
USP28-205ENST00000537706 CLCA4Q14CN2 919 aa9.63□□□□□ -0.87
USP28-205ENST00000537706 SRRM1Q8IYB3 904 aaKnown RBP9.63□□□□□ -0.87
USP28-205ENST00000537706 KCTD17Q8N5Z5 321 aa9.63□□□□□ -0.87
USP28-205ENST00000537706 FBXO44Q9H4M3 255 aa9.63□□□□□ -0.87
USP28-205ENST00000537706 ZNF768Q9H5H4 540 aaKnown RBP9.63□□□□□ -0.87
USP28-205ENST00000537706 NLGN3Q9NZ94 848 aa9.63□□□□□ -0.87
USP28-205ENST00000537706 FZD4Q9ULV1 537 aa9.63□□□□□ -0.87
USP28-205ENST00000537706 MYOFQ9NZM1 2061 aa9.63□□□□□ -0.87
USP28-205ENST00000537706 VPS4BO75351 444 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 RNASEH2AO75792 299 aaKnown RBP9.62□□□□□ -0.87
USP28-205ENST00000537706 FAM13AO94988 1023 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 DDAH2O95865 285 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 ATP5BP06576 529 aaKnown RBP9.62□□□□□ -0.87
USP28-205ENST00000537706 DGKAP23743 735 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 GNL1P36915 607 aaPredicted RBP9.62□□□□□ -0.87
USP28-205ENST00000537706 TOB2Q14106 344 aaPredicted RBP9.62□□□□□ -0.87
USP28-205ENST00000537706 ZNF174Q15697 407 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 RUFY3Q7L099 469 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 MYCT1Q8N699 235 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 C1orf127Q8N9H9 656 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 C9orf43Q8TAL5 461 aaPredicted RBP9.62□□□□□ -0.87
USP28-205ENST00000537706 SORCS1Q8WY21 1168 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 POMGNT1Q8WZA1 660 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 MIB2Q96AX9 1013 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 ANKRD36BP1Q96IX9 119 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 PIWIL1Q96J94 861 aaKnown RBP9.62□□□□□ -0.87
USP28-205ENST00000537706 APOLD1Q96LR9 279 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 MED10Q9BTT4 135 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 KDM4CQ9H3R0 1056 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 PRSS16Q9NQE7 514 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 CUEDC1Q9NWM3 386 aaPredicted RBP9.62□□□□□ -0.87
USP28-205ENST00000537706 ODF2LQ9ULJ1 636 aa9.62□□□□□ -0.87
USP28-205ENST00000537706 VPS4AQ9UN37 437 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms