RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 LINC01465Q8N7H1 131 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 DNAAF3Q8N9W5 541 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 OR10T2Q8NGX3 314 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 CFAP61Q8NHU2 1237 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 PABPC5Q96DU9 382 aaKnown RBP8.51□□□□□ -1.05
ABCA4-207ENST00000536513 RBM41Q96IZ5 413 aaKnown RBP8.51□□□□□ -1.05
ABCA4-207ENST00000536513 SMC6Q96SB8 1091 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 CYTH2Q99418 400 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 WDCPQ9H6R7 721 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 PLK2Q9NYY3 685 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 MPP6Q9NZW5 540 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 COMMD10Q9Y6G5 202 aa8.51□□□□□ -1.05
ABCA4-207ENST00000536513 EYSQ5T1H1 3165 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 CCDC188H7C350 402 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 TRAPPC3O43617 180 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 PHF2O75151 1096 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 PAEPP09466 180 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 CCND1P24385 295 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 SNX16P57768 344 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 GAD2Q05329 585 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 PTK7Q13308 1070 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 PCSK7Q16549 785 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 QPCTQ16769 361 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 HHATQ5VTY9 493 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 KIAA0319Q5VV43 1072 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 CES3Q6UWW8 571 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 PID1Q7Z2X4 250 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 PALM2Q8IXS6 379 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 C7orf61Q8IZ16 206 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 ANKRD52Q8NB46 1076 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 GSTCDQ8NEC7 633 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 SH3GL2Q99962 352 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 ERP44Q9BS26 406 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 IL1RAPL1Q9NZN1 696 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 STAP1Q9ULZ2 295 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 NUP205Q92621 2012 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 A0A0A6YYK5 440 aaPredicted RBP8.5□□□□□ -1.05
ABCA4-207ENST00000536513 SHOX2O60902 331 aaPredicted RBP8.5□□□□□ -1.05
ABCA4-207ENST00000536513 EN2P19622 333 aaPredicted RBP8.5□□□□□ -1.05
ABCA4-207ENST00000536513 SERPINB4P48594 390 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 GBE1Q04446 702 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 ZNF252P-AS1Q0IIN9 211 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 PDIA2Q13087 525 aaKnown RBP8.5□□□□□ -1.05
ABCA4-207ENST00000536513 IKBKEQ14164 716 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 SLC29A2Q14542 456 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 TFDP3Q5H9I0 405 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 CLLU1OSQ5K130 101 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 ANKRD20A3Q5VUR7 823 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 PLEKHA7Q6IQ23 1121 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 TAS1R1Q7RTX1 841 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 CIR1Q86X95 450 aaPredicted RBP8.5□□□□□ -1.05
ABCA4-207ENST00000536513 PHF13Q86YI8 300 aaPredicted RBP8.5□□□□□ -1.05
ABCA4-207ENST00000536513 CFAP52Q8N1V2 620 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 LRRC8CQ8TDW0 803 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 FBXO32Q969P5 355 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 CNPY3Q9BT09 278 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 ALG13Q9NP73 1137 aaKnown RBP8.5□□□□□ -1.05
ABCA4-207ENST00000536513 CNTN3Q9P232 1028 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 KLHL8Q9P2G9 620 aaPredicted RBP8.5□□□□□ -1.05
ABCA4-207ENST00000536513 VANGL2Q9ULK5 521 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 ZSWIM8A7E2V4 1837 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 MOXD2PA6NHM9 499 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 SIGLEC16A6NMB1 481 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 ATP9BO43861 1147 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 ATP5DP30049 168 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 TPI1P60174 286 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 OLIG2Q13516 323 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 PUS10Q3MIT2 529 aaKnown RBP8.5□□□□□ -1.05
ABCA4-207ENST00000536513 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.5□□□□□ -1.05
ABCA4-207ENST00000536513 EFHC2Q5JST6 749 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 LCLAT1Q6UWP7 414 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 CLEC20AQ6ZU45 233 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 LRRC52Q8N7C0 313 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 PDCD7Q8N8D1 485 aaKnown RBP8.5□□□□□ -1.05
ABCA4-207ENST00000536513 NAF1Q96HR8 494 aaKnown RBP8.5□□□□□ -1.05
ABCA4-207ENST00000536513 TRIM56Q9BRZ2 755 aaKnown RBP8.5□□□□□ -1.05
ABCA4-207ENST00000536513 NFKBIZQ9BYH8 718 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 TKTL2Q9H0I9 626 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 TMEM30AQ9NV96 361 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 TSR3Q9UJK0 312 aaKnown RBP8.5□□□□□ -1.05
ABCA4-207ENST00000536513 CHMP2BQ9UQN3 213 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 IKBKGQ9Y6K9 419 aa8.5□□□□□ -1.05
ABCA4-207ENST00000536513 GOLGA8TH3BQL2 631 aa8.49□□□□□ -1.05
ABCA4-207ENST00000536513 ENPP3O14638 875 aa8.49□□□□□ -1.05
ABCA4-207ENST00000536513 CABYRO75952 493 aa8.49□□□□□ -1.05
ABCA4-207ENST00000536513 NQO1P15559 274 aaKnown RBP8.49□□□□□ -1.05
ABCA4-207ENST00000536513 CHRNA3P32297 505 aa8.49□□□□□ -1.05
ABCA4-207ENST00000536513 ABCG1P45844 678 aa8.49□□□□□ -1.05
ABCA4-207ENST00000536513 LHX1P48742 406 aa8.49□□□□□ -1.05
ABCA4-207ENST00000536513 GDF10P55107 478 aa8.49□□□□□ -1.05
ABCA4-207ENST00000536513 DEFB103AP81534 67 aa8.49□□□□□ -1.05
ABCA4-207ENST00000536513 CCDC14Q49A88 953 aa8.49□□□□□ -1.05
ABCA4-207ENST00000536513 VARS2Q5ST30 1063 aaKnown RBP8.49□□□□□ -1.05
ABCA4-207ENST00000536513 C11orf63Q6NUN7 778 aa8.49□□□□□ -1.05
ABCA4-207ENST00000536513 ARHGEF18Q6ZSZ5 1173 aa8.49□□□□□ -1.05
ABCA4-207ENST00000536513 DENND5BQ6ZUT9 1274 aa8.49□□□□□ -1.05
ABCA4-207ENST00000536513 RAB3IL1Q8TBN0 382 aa8.49□□□□□ -1.05
ABCA4-207ENST00000536513 RSPH1Q8WYR4 309 aa8.49□□□□□ -1.05
ABCA4-207ENST00000536513 FAM136AQ96C01 138 aa8.49□□□□□ -1.05
ABCA4-207ENST00000536513 PEBP4Q96S96 227 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms