RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 ZACNQ401N2 412 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 TTC31Q49AM3 519 aaPredicted RBP8.42□□□□□ -1.06
CHFR-211ENST00000535897 CEP135Q66GS9 1140 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 CNNM4Q6P4Q7 775 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 DBX2Q6ZNG2 339 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 CCDC186Q7Z3E2 898 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 SCD5Q86SK9 330 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 ARHGAP18Q8N392 663 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 CCDC150Q8NCX0 1101 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 C1orf216Q8TAB5 229 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 GANCQ8TET4 914 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 CYB5D2Q8WUJ1 264 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 IGSF8Q969P0 613 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 BIRC7Q96CA5 298 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 NXPE2Q96DL1 559 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 PIWIL1Q96J94 861 aaKnown RBP8.42□□□□□ -1.06
CHFR-211ENST00000535897 TWNKQ96RR1 684 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 UBL7Q96S82 380 aaPredicted RBP8.42□□□□□ -1.06
CHFR-211ENST00000535897 SLC2A11Q9BYW1 496 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 BTBD1Q9H0C5 482 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 ZSCAN16Q9H4T2 348 aaPredicted RBP8.42□□□□□ -1.06
CHFR-211ENST00000535897 MMRN2Q9H8L6 949 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 MAGEF1Q9HAY2 307 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 PNPLA8Q9NP80 782 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 MARCH2Q9P0N8 246 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 AGO1Q9UL18 857 aaKnown RBP8.42□□□□□ -1.06
CHFR-211ENST00000535897 CLEC4EQ9ULY5 219 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 PLA2G4CQ9UP65 541 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 MTMR6Q9Y217 621 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 FRMD4BQ9Y2L6 1034 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 MORC2Q9Y6X9 1032 aaPredicted RBP8.42□□□□□ -1.06
CHFR-211ENST00000535897 ASXL3Q9C0F0 2248 aa8.42□□□□□ -1.06
CHFR-211ENST00000535897 NUMA1Q14980 2115 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 TP53BP1Q12888 1972 aaPredicted RBP8.41□□□□□ -1.06
CHFR-211ENST00000535897 H0Y8X5 98 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 PLK4O00444 970 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 TIMM44O43615 452 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 TSPAN3O60637 253 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 CUTAO60888 179 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 PPP6R2O75170 966 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 DKK1O94907 266 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 HLA-DRAP01903 254 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 NR3C1P04150 777 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 ABCB4P21439 1286 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 CD27P26842 260 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 GRIA4P48058 902 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 HARS2P49590 506 aaKnown RBP8.41□□□□□ -1.06
CHFR-211ENST00000535897 SLC8A3P57103 927 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 YWHAGP61981 247 aaKnown RBP eCLIP8.41□□□□□ -1.06
CHFR-211ENST00000535897 SEMG2Q02383 582 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 EHHADHQ08426 723 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 INCA1Q0VD86 236 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 CAMK2BQ13554 666 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 CAMK2GQ13555 558 aaPredicted RBP8.41□□□□□ -1.06
CHFR-211ENST00000535897 CUL4AQ13619 759 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 CUL4BQ13620 913 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 SMAD1Q15797 465 aaKnown RBP8.41□□□□□ -1.06
CHFR-211ENST00000535897 MPPE1Q53F39 396 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 ZNF394Q53GI3 561 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 C6orf118Q5T5N4 469 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 SHC4Q6S5L8 630 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 LRRC69Q6ZNQ3 347 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 SV2AQ7L0J3 742 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 CHST9Q7L1S5 443 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 CPXM2Q8N436 756 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 LINC00301Q8NCQ3 95 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 ZNF396Q96N95 335 aaPredicted RBP8.41□□□□□ -1.06
CHFR-211ENST00000535897 ARID3AQ99856 593 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 DUSP16Q9BY84 665 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 ACE2Q9BYF1 805 aaPredicted RBP8.41□□□□□ -1.06
CHFR-211ENST00000535897 EXOC1Q9NV70 894 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 FAM13BQ9NYF5 915 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 NCKAP1Q9Y2A7 1128 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 AK5Q9Y6K8 562 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 MAST4O15021 2626 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 ZNF462Q96JM2 2506 aa8.41□□□□□ -1.06
CHFR-211ENST00000535897 PVALEFA0A1B0GWK0 134 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 IKBKBO14920 756 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 RRP8O43159 456 aaKnown RBP8.4□□□□□ -1.06
CHFR-211ENST00000535897 PCDHGA12O60330 932 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 JUPP14923 745 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 ITPKBP27987 946 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 CTSKP43235 329 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 ME1P48163 572 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 GCLMP48507 274 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 CLDN6P56747 220 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 RPS14P62263 151 aaKnown RBP8.4□□□□□ -1.06
CHFR-211ENST00000535897 ZBTB16Q05516 673 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 PTPRNQ16849 979 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 FOXD4L6Q3SYB3 417 aaPredicted RBP8.4□□□□□ -1.06
CHFR-211ENST00000535897 PRAMEF14Q5SWL7 426 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 PPP1R26Q5T8A7 1209 aaPredicted RBP8.4□□□□□ -1.06
CHFR-211ENST00000535897 FOXD4L5Q5VV16 416 aaPredicted RBP8.4□□□□□ -1.06
CHFR-211ENST00000535897 TMEM215Q68D42 235 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 FOXD4L3Q6VB84 417 aaPredicted RBP8.4□□□□□ -1.06
CHFR-211ENST00000535897 TMPRSS12Q86WS5 348 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 GATAD2AQ86YP4 633 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 GRAMD1CQ8IYS0 662 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 CEP57L1Q8IYX8 460 aa8.4□□□□□ -1.06
CHFR-211ENST00000535897 AHI1Q8N157 1196 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms