RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 ITM2CQ9NQX7 267 aa21.53■■□□□ 1.04
LTBR-205ENST00000535739 HESX1Q9UBX0 185 aa21.53■■□□□ 1.04
LTBR-205ENST00000535739 SFMBT1Q9UHJ3 866 aa21.53■■□□□ 1.04
LTBR-205ENST00000535739 ZMIZ1Q9ULJ6 1067 aa21.53■■□□□ 1.04
LTBR-205ENST00000535739 SYNCRIPO60506 623 aaKnown RBP21.52■■□□□ 1.04
LTBR-205ENST00000535739 TSPAN3O60637 253 aa21.52■■□□□ 1.04
LTBR-205ENST00000535739 CD59P13987 128 aa21.52■■□□□ 1.04
LTBR-205ENST00000535739 PRKCHP24723 683 aa21.52■■□□□ 1.04
LTBR-205ENST00000535739 ZNF132P52740 706 aa21.52■■□□□ 1.04
LTBR-205ENST00000535739 FAM193AP78312 1265 aa21.52■■□□□ 1.04
LTBR-205ENST00000535739 COBLL1Q53SF7 1204 aa21.52■■□□□ 1.04
LTBR-205ENST00000535739 WDR45BQ5MNZ6 344 aa21.52■■□□□ 1.04
LTBR-205ENST00000535739 GSDMAQ96QA5 445 aa21.52■■□□□ 1.04
LTBR-205ENST00000535739 GPR174Q9BXC1 333 aa21.52■■□□□ 1.04
LTBR-205ENST00000535739 SLC2A11Q9BYW1 496 aa21.52■■□□□ 1.04
LTBR-205ENST00000535739 OLA1Q9NTK5 396 aaKnown RBP21.52■■□□□ 1.04
LTBR-205ENST00000535739 DNAAF2Q9NVR5 837 aaKnown RBP21.52■■□□□ 1.04
LTBR-205ENST00000535739 SUSD2Q9UGT4 822 aa21.52■■□□□ 1.04
LTBR-205ENST00000535739 YJEFN3A6XGL0 299 aa21.51■■□□□ 1.03
LTBR-205ENST00000535739 MEI4A8MW99 385 aa21.51■■□□□ 1.03
LTBR-205ENST00000535739 E7ENQ6 273 aa21.51■■□□□ 1.03
LTBR-205ENST00000535739 NCAM1P13591 858 aa21.51■■□□□ 1.03
LTBR-205ENST00000535739 GNSP15586 552 aa21.51■■□□□ 1.03
LTBR-205ENST00000535739 HOXD9P28356 352 aaPredicted RBP21.51■■□□□ 1.03
LTBR-205ENST00000535739 HARS2P49590 506 aaKnown RBP21.51■■□□□ 1.03
LTBR-205ENST00000535739 TPMTP51580 245 aa21.51■■□□□ 1.03
LTBR-205ENST00000535739 COPAP53621 1224 aa21.51■■□□□ 1.03
LTBR-205ENST00000535739 YWHAEP62258 255 aaKnown RBP21.51■■□□□ 1.03
LTBR-205ENST00000535739 EIF4HQ15056 248 aaKnown RBP21.51■■□□□ 1.03
LTBR-205ENST00000535739 MPPE1Q53F39 396 aa21.51■■□□□ 1.03
LTBR-205ENST00000535739 BSPRYQ5W0U4 402 aa21.51■■□□□ 1.03
LTBR-205ENST00000535739 CACUL1Q86Y37 369 aa21.51■■□□□ 1.03
LTBR-205ENST00000535739 UBR7Q8N806 425 aa21.51■■□□□ 1.03
LTBR-205ENST00000535739 KDF1Q8NAX2 398 aaPredicted RBP21.51■■□□□ 1.03
LTBR-205ENST00000535739 RNF139Q8WU17 664 aa21.51■■□□□ 1.03
LTBR-205ENST00000535739 GATA6Q92908 595 aa21.51■■□□□ 1.03
LTBR-205ENST00000535739 SLC35C1Q96A29 364 aa21.51■■□□□ 1.03
LTBR-205ENST00000535739 SIPA1Q96FS4 1042 aa21.51■■□□□ 1.03
LTBR-205ENST00000535739 ARMCX3Q9UH62 379 aaPredicted RBP21.51■■□□□ 1.03
LTBR-205ENST00000535739 FAM208BQ5VWN6 2430 aa21.5■■□□□ 1.03
LTBR-205ENST00000535739 O00370 1275 aa21.5■■□□□ 1.03
LTBR-205ENST00000535739 GJB3O75712 270 aa21.5■■□□□ 1.03
LTBR-205ENST00000535739 EPHX1P07099 455 aa21.5■■□□□ 1.03
LTBR-205ENST00000535739 VDRP11473 427 aa21.5■■□□□ 1.03
LTBR-205ENST00000535739 SERPINA13PQ6UXR4 307 aa21.5■■□□□ 1.03
LTBR-205ENST00000535739 SIX6OS1Q8N1H7 587 aa21.5■■□□□ 1.03
LTBR-205ENST00000535739 PRCCQ92733 491 aaPredicted RBP21.5■■□□□ 1.03
LTBR-205ENST00000535739 CAMK1GQ96NX5 476 aa21.5■■□□□ 1.03
LTBR-205ENST00000535739 RALYQ9UKM9 306 aaKnown RBP21.5■■□□□ 1.03
LTBR-205ENST00000535739 HBS1LQ9Y450 684 aaKnown RBP21.5■■□□□ 1.03
LTBR-205ENST00000535739 MSI1O43347 362 aaKnown RBP21.49■■□□□ 1.03
LTBR-205ENST00000535739 TIMM44O43615 452 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 HLA-EP13747 358 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 LCP1P13796 627 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 NUCB2P80303 420 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 ARID5AQ03989 594 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 LRRC63Q05C16 580 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 GRIK2Q13002 908 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 E2F5Q15329 346 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 PKDCCQ504Y2 493 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 DCAF12L1Q5VU92 463 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 ENGASEQ8NFI3 743 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 SPATA20Q8TB22 786 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 KCTD13Q8WZ19 329 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 DNASE2BQ8WZ79 361 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 TFAP2BQ92481 460 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 SMARCE1Q969G3 411 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 MIR1-1HGQ9H1L0 117 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 KLK13Q9UKR3 277 aa21.49■■□□□ 1.03
LTBR-205ENST00000535739 MUC22E2RYF6 1773 aaPredicted RBP21.48■■□□□ 1.03
LTBR-205ENST00000535739 CABIN1Q9Y6J0 2220 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 SH3BP5O60239 455 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 GABBR2O75899 941 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 SMC2O95347 1197 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 SETSIPP0DME0 302 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 ACADMP11310 421 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 TBXAS1P24557 533 aaPredicted RBP21.48■■□□□ 1.03
LTBR-205ENST00000535739 HLA-FP30511 346 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 OXTRP30559 389 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 RGS7P49802 495 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 DAOAP59103 153 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 TMEM270Q6UE05 265 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 ZCCHC9Q8N567 271 aaKnown RBP21.48■■□□□ 1.03
LTBR-205ENST00000535739 CADM4Q8NFZ8 388 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 CYB5D2Q8WUJ1 264 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 TMA16Q96EY4 203 aaKnown RBP21.48■■□□□ 1.03
LTBR-205ENST00000535739 CNGB3Q9NQW8 809 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 ABCC13Q9NSE7 274 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 CHMP5Q9NZZ3 219 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 STOML2Q9UJZ1 356 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 KIAA1257Q9ULG3 409 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 NEUROG3Q9Y4Z2 214 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 FREM2Q5SZK8 3169 aa21.48■■□□□ 1.03
LTBR-205ENST00000535739 A0A1B0GTW7 788 aa21.47■■□□□ 1.03
LTBR-205ENST00000535739 GOLGA6L4A6NEF3 574 aa21.47■■□□□ 1.03
LTBR-205ENST00000535739 PIK3R2O00459 728 aa21.47■■□□□ 1.03
LTBR-205ENST00000535739 FMO5P49326 533 aa21.47■■□□□ 1.03
LTBR-205ENST00000535739 SGSHP51688 502 aa21.47■■□□□ 1.03
LTBR-205ENST00000535739 ADGRF1Q5T601 910 aa21.47■■□□□ 1.03
LTBR-205ENST00000535739 ISM2Q6H9L7 571 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms