RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 IRAK2O43187 625 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 MED7O43513 233 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 GREM1O60565 184 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 FBXO21O94952 628 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 CISD3P0C7P0 127 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 POLR2EP19388 210 aaKnown RBP13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 PGFP49763 221 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 FUT11Q495W5 492 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 COBLL1Q53SF7 1204 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 RAB41Q5JT25 222 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 ADGRF1Q5T601 910 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 BSPRYQ5W0U4 402 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 KIAA1211LQ6NV74 962 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 ADAT2Q7Z6V5 191 aaKnown RBP13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 UBA3Q8TBC4 463 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 GANCQ8TET4 914 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 KCTD13Q8WZ19 329 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 IRGQQ8WZA9 623 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 EDEM1Q92611 657 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 TATDN2Q93075 761 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 ZNF419Q96HQ0 510 aaPredicted RBP13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 FAM81BQ96LP2 452 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 TIGD1Q96MW7 591 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 GOLPH3LQ9H4A5 285 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 SUN2Q9UH99 717 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 NFE2L3Q9Y4A8 694 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 SPTBN2O15020 2390 aa13.82□□□□□ -0.2
CLSTN3-205ENST00000535452 P4HA2O15460 535 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 TSPAN3O60637 253 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 KRT37O76014 449 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 IL12RB1P42701 662 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 FMO5P49326 533 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 CDH18Q13634 790 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 ZNF234Q14588 700 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 TRIP4Q15650 581 aaPredicted RBP13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 GEN1Q17RS7 908 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 INAVAQ3KP66 663 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 CBWD6Q4V339 395 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 CBWD3Q5JTY5 395 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 CBWD5Q5RIA9 395 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 RNF219Q5W0B1 726 aaPredicted RBP13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 ANKRD40Q6AI12 368 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 PM20D1Q6GTS8 502 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 KLHL10Q6JEL2 608 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 CHST9Q7L1S5 443 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 CACUL1Q86Y37 369 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 CREBRFQ8IUR6 639 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 OR2T3Q8NH03 318 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 SETD7Q8WTS6 366 aaKnown RBP13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 FAM149B1Q96BN6 582 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 SERPINB11Q96P15 392 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 SCNM1Q9BWG6 230 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 PCED1AQ9H1Q7 454 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 LHX5Q9H2C1 402 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 ITM2CQ9NQX7 267 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 ST7Q9NRC1 585 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 SFMBT1Q9UHJ3 866 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 SLC12A6Q9UHW9 1150 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 FBXO10Q9UK96 956 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 APOBEC2Q9Y235 224 aaKnown RBP13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 ZDHHC9Q9Y397 364 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 COQ4Q9Y3A0 265 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 DNAH14Q0VDD8 3507 aa13.81□□□□□ -0.2
CLSTN3-205ENST00000535452 NUP205Q92621 2012 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 WASH3PC4AMC7 463 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 BCAT2O15382 392 aaPredicted RBP13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 APOEP02649 317 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 KLKB1P03952 638 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 KRT5P13647 590 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 NNMTP40261 264 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 MATKP42679 507 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 ACADSBP45954 432 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 TPMTP51580 245 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 TBX4P57082 545 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 SNX16P57768 344 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 ZBTB16Q05516 673 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 SEMA3BQ13214 749 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 DCAF12L1Q5VU92 463 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 MFN1Q8IWA4 741 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 FMR1NBQ8N0W7 255 aaPredicted RBP13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 ZCCHC9Q8N567 271 aaKnown RBP13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 HJURPQ8NCD3 748 aaPredicted RBP13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 HSFY1Q96LI6 401 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 PPP1R9BQ96SB3 815 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 BTBD1Q9H0C5 482 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 CAPN10Q9HC96 672 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 WSB2Q9NYS7 404 aaPredicted RBP13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 TJP2Q9UDY2 1190 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 GGA2Q9UJY4 613 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 NEUROG3Q9Y4Z2 214 aa13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLSTN3-205ENST00000535452 O00370 1275 aa13.79□□□□□ -0.2
CLSTN3-205ENST00000535452 TBL1XO60907 577 aa13.79□□□□□ -0.2
CLSTN3-205ENST00000535452 LTFP02788 710 aa13.79□□□□□ -0.2
CLSTN3-205ENST00000535452 PABPC1P11940 636 aaKnown RBP13.79□□□□□ -0.2
CLSTN3-205ENST00000535452 RGS7P49802 495 aa13.79□□□□□ -0.2
CLSTN3-205ENST00000535452 TRIP6Q15654 476 aaKnown RBP13.79□□□□□ -0.2
CLSTN3-205ENST00000535452 CNGA2Q16280 664 aa13.79□□□□□ -0.2
CLSTN3-205ENST00000535452 MPP7Q5T2T1 576 aa13.79□□□□□ -0.2
CLSTN3-205ENST00000535452 LCLAT1Q6UWP7 414 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms