RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 CHKBQ9Y259 395 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 COQ6Q9Y2Z9 468 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 PCDHB4Q9Y5E5 795 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 NOTOA8MTQ0 251 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 ADAMTS4O75173 837 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 KRT19P08727 400 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 EFNA5P52803 228 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 TAS2R40P59535 323 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 AUHQ13825 339 aaKnown RBP9.33□□□□□ -0.92
SF3B2-216ENST00000534765 SPARCL1Q14515 664 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 MESDQ14696 234 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 FSCN1Q16658 493 aaKnown RBP9.33□□□□□ -0.92
SF3B2-216ENST00000534765 PARP6Q2NL67 630 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 SH3PXD2AQ5TCZ1 1133 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 TTC27Q6P3X3 843 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 KBTBD2Q8IY47 623 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 ZNF606Q8WXB4 792 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 TLCD1Q96CP7 247 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 KLF6Q99612 283 aaPredicted RBP9.33□□□□□ -0.92
SF3B2-216ENST00000534765 MIOSQ9NXC5 875 aa9.33□□□□□ -0.92
SF3B2-216ENST00000534765 PDLIM1O00151 329 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 GIPC1O14908 333 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 CA12O43570 354 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 B4GALT4O60513 344 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 CTSHP09668 335 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 CYP2C9P11712 490 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 POLR2BP30876 1174 aaKnown RBP9.32□□□□□ -0.92
SF3B2-216ENST00000534765 CD97P48960 835 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 PDK3Q15120 406 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 SIX1Q15475 284 aaPredicted RBP9.32□□□□□ -0.92
SF3B2-216ENST00000534765 ALKAL1Q6UXT8 129 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 GSTA5Q7RTV2 222 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 JAMLQ86YT9 394 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 MCOLN2Q8IZK6 566 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 C1orf131Q8NDD1 294 aaKnown RBP9.32□□□□□ -0.92
SF3B2-216ENST00000534765 GTF3C2Q8WUA4 911 aaPredicted RBP9.32□□□□□ -0.92
SF3B2-216ENST00000534765 RFFLQ8WZ73 363 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 LPPQ93052 612 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 APBA2Q99767 749 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 C11orf70Q9BRQ4 267 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 TRANK1O15050 2925 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 B4GALT3O60512 393 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 CYP1A2P05177 515 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 PFKMP08237 780 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 FGFR1P11362 822 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 OCRLQ01968 901 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 GSTM4Q03013 218 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 SNX17Q15036 470 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 OASLQ15646 514 aaKnown RBP9.32□□□□□ -0.92
SF3B2-216ENST00000534765 CNGA3Q16281 694 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 TRIM16LQ309B1 348 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 SEL1L2Q5TEA6 688 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 KLHDC10Q6PID8 442 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 TMC5Q6UXY8 1006 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 SLC4A11Q8NBS3 891 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 SLC35B4Q969S0 331 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 MRPL45Q9BRJ2 306 aaKnown RBP9.32□□□□□ -0.92
SF3B2-216ENST00000534765 ERP44Q9BS26 406 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 Q9H521 79 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 PARVBQ9HBI1 364 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 RRN3Q9NYV6 651 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 MARCOQ9UEW3 520 aaPredicted RBP9.32□□□□□ -0.92
SF3B2-216ENST00000534765 A6NL46 340 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 CSPG5O95196 566 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 MYCP01106 439 aaPredicted RBP9.32□□□□□ -0.92
SF3B2-216ENST00000534765 PORP16435 677 aaPredicted RBP9.32□□□□□ -0.92
SF3B2-216ENST00000534765 CDH3P22223 829 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 STT3AP46977 705 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 ENTPD1P49961 510 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 POU5F1Q01860 360 aaKnown RBP9.32□□□□□ -0.92
SF3B2-216ENST00000534765 MTM1Q13496 603 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 GSTA3Q16772 222 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 ANO4Q32M45 955 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 SLFN12LQ6IEE8 588 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 LPCAT2Q7L5N7 544 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 CTU1Q7Z7A3 348 aaKnown RBP9.32□□□□□ -0.92
SF3B2-216ENST00000534765 ZBTB8OSQ8IWT0 167 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 EFCAB3Q8N7B9 438 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 PPP1R14CQ8TAE6 165 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 C18orf8Q96DM3 657 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 RUNDC3BQ96NL0 473 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 CADM1Q9BY67 442 aaKnown RBP9.32□□□□□ -0.92
SF3B2-216ENST00000534765 SLITRK6Q9H5Y7 841 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 GPBP1L1Q9HC44 474 aaPredicted RBP9.32□□□□□ -0.92
SF3B2-216ENST00000534765 TRMT13Q9NUP7 481 aaKnown RBP9.32□□□□□ -0.92
SF3B2-216ENST00000534765 GIMAP4Q9NUV9 329 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 PTTG2Q9NZH5 202 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 SATB2Q9UPW6 733 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 ATP11BQ9Y2G3 1177 aa9.32□□□□□ -0.92
SF3B2-216ENST00000534765 C2orf71A6NGG8 1288 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 A8MU76 341 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 TP73O15350 636 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 SPOPO43791 374 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 ZWINTO95229 277 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 COL6A2P12110 1019 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 ANPEPP15144 967 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 NR4A1P22736 598 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 LMO2P25791 158 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 GNA15P30679 374 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 ADCY8P40145 1251 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms