RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 LAMC1P11047 1609 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 MST1RQ04912 1400 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 ADGRL3Q9HAR2 1447 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 NCOA3Q9Y6Q9 1424 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 METP08581 1390 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 MSH6P52701 1360 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 PRRT4C9JH25 899 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 POC1B-GALNT4F8VUJ3 575 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 hCG_1984214I3L0E3 225 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 SMIM22K7EJ46 135 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 PPP6CO00743 305 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 TPPPO94811 219 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 TNNT1P13805 278 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 GCFC2P16383 781 aaKnown RBP4.69□□□□□ -1.66
ITGB1-219ENST00000534049 EPHB2P29323 1055 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 ALDH1B1P30837 517 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 NF2P35240 595 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 MTHFSP49914 203 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 RPS6KA3P51812 740 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 RBM5P52756 815 aaKnown RBP eCLIP4.69□□□□□ -1.66
ITGB1-219ENST00000534049 CYP4F2P78329 520 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 SSBP2P81877 361 aaPredicted RBP4.69□□□□□ -1.66
ITGB1-219ENST00000534049 DEUP1Q05D60 604 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 GRIK3Q13003 919 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 CTBP1Q13363 440 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 CCNIQ14094 377 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 NEDD9Q14511 834 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 MTX3Q5HYI7 312 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 C16orf87Q6PH81 154 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 CCDC80Q76M96 950 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 OVCH2Q7RTZ1 564 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 ANKRD18AQ8IVF6 992 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 SMC5Q8IY18 1101 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 C10orf67Q8IYJ2 551 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 KIAA0319LQ8IZA0 1049 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 GALNT4Q8N4A0 578 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 SIRT6Q8N6T7 355 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 IL31RAQ8NI17 732 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 BPIFB1Q8TDL5 484 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 DDB2Q92466 427 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 SPSB4Q96A44 273 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 ASB2Q96Q27 587 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 FYTTD1Q96QD9 318 aaKnown RBP4.69□□□□□ -1.66
ITGB1-219ENST00000534049 THAP7Q9BT49 309 aaPredicted RBP4.69□□□□□ -1.66
ITGB1-219ENST00000534049 TRIM6Q9C030 488 aaPredicted RBP4.69□□□□□ -1.66
ITGB1-219ENST00000534049 ZCWPW1Q9H0M4 648 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 TRIM36Q9NQ86 728 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 ANLNQ9NQW6 1124 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 TCEAL9Q9UHQ7 104 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 BLOC1S6Q9UL45 172 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 MRPS17Q9Y2R5 130 aaKnown RBP4.69□□□□□ -1.66
ITGB1-219ENST00000534049 CDC42BPGQ6DT37 1551 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 EP400Q96L91 3159 aa4.69□□□□□ -1.66
ITGB1-219ENST00000534049 A0A1B0GUA9 196 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 LOC102723971A0A1B0GUV8 181 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 GOLGA6L19H0YKK7 550 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 NPHP1O15259 732 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 CCDC159P0C7I6 412 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 PRR35P0CG20 571 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 KITP10721 976 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 HARSP12081 509 aaKnown RBP4.68□□□□□ -1.66
ITGB1-219ENST00000534049 PECAM1P16284 738 aaPredicted RBP4.68□□□□□ -1.66
ITGB1-219ENST00000534049 KLRC1P26715 233 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 CTGFP29279 349 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 EPHA3P29320 983 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 PTGER1P34995 402 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 BCAT1P54687 386 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 RRP1P56182 461 aaKnown RBP4.68□□□□□ -1.66
ITGB1-219ENST00000534049 NFE2Q16621 373 aaPredicted RBP4.68□□□□□ -1.66
ITGB1-219ENST00000534049 KLHL40Q2TBA0 621 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 HHATQ5VTY9 493 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 PAPD7Q5XG87 772 aaKnown RBP4.68□□□□□ -1.66
ITGB1-219ENST00000534049 KIRREL2Q6UWL6 708 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 NAPRTQ6XQN6 538 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 CLEC17AQ6ZS10 378 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 SRGAP1Q7Z6B7 1085 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 CAND1Q86VP6 1230 aaKnown RBP4.68□□□□□ -1.66
ITGB1-219ENST00000534049 ZNF280BQ86YH2 543 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 SFTPA1Q8IWL2 248 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 TCEAL8Q8IYN2 117 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.68□□□□□ -1.66
ITGB1-219ENST00000534049 TERB1Q8NA31 727 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 FAM76AQ8TAV0 307 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 CYP2W1Q8TAV3 490 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 SCARB1Q8WTV0 552 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 SLX1AQ9BQ83 275 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 THUMPD2Q9BTF0 503 aaKnown RBP4.68□□□□□ -1.66
ITGB1-219ENST00000534049 UNC45AQ9H3U1 944 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 RWDD1Q9H446 243 aaPredicted RBP4.68□□□□□ -1.66
ITGB1-219ENST00000534049 RETREG1Q9H6L5 497 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 TMOD4Q9NZQ9 345 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 RNF7Q9UBF6 113 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 AMFRQ9UKV5 643 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 TPCN1Q9ULQ1 816 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 RRP15Q9Y3B9 282 aaKnown RBP4.68□□□□□ -1.66
ITGB1-219ENST00000534049 IFT172Q9UG01 1749 aa4.68□□□□□ -1.66
ITGB1-219ENST00000534049 COL3A1P02461 1466 aaPredicted RBP4.68□□□□□ -1.66
ITGB1-219ENST00000534049 ROCK2O75116 1388 aaKnown RBP4.67□□□□□ -1.66
ITGB1-219ENST00000534049 JCADQ9P266 1359 aa4.67□□□□□ -1.66
ITGB1-219ENST00000534049 KAT6AQ92794 2004 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms