RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 KIF19Q2TAC6 998 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 MPPE1Q53F39 396 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 DBX2Q6ZNG2 339 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 LRRC69Q6ZNQ3 347 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 SV2AQ7L0J3 742 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 SLC9A9Q8IVB4 645 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 CPXM2Q8N436 756 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 PLEKHO2Q8TD55 490 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 TMC2Q8TDI7 906 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 GOLGA1Q92805 767 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 ELMO3Q96BJ8 720 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 PLD4Q96BZ4 506 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 INTS4Q96HW7 963 aaKnown RBP12.1□□□□□ -0.47
CMTM1-216ENST00000533078 DCBLD2Q96PD2 775 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 UBL7Q96S82 380 aaPredicted RBP12.1□□□□□ -0.47
CMTM1-216ENST00000533078 DUSP16Q9BY84 665 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 BACH2Q9BYV9 841 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 NIF3L1Q9GZT8 377 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 OSGEPQ9NPF4 335 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 OLA1Q9NTK5 396 aaKnown RBP12.1□□□□□ -0.47
CMTM1-216ENST00000533078 AGO1Q9UL18 857 aaKnown RBP12.1□□□□□ -0.47
CMTM1-216ENST00000533078 MTMR6Q9Y217 621 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 NCKAP1Q9Y2A7 1128 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 SNX11Q9Y5W9 270 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 KNL1Q8NG31 2342 aa12.1□□□□□ -0.47
CMTM1-216ENST00000533078 SLC12A8A0AV02 714 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 PCDHGA12O60330 932 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 FSBPO95073 299 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 KLKB1P03952 638 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 NR3C1P04150 777 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 ATP5BP06576 529 aaKnown RBP12.09□□□□□ -0.47
CMTM1-216ENST00000533078 KRT13P13646 458 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 CD27P26842 260 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 C19orf57Q0VDD7 668 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 SMAD1Q15797 465 aaKnown RBP12.09□□□□□ -0.47
CMTM1-216ENST00000533078 C6orf118Q5T5N4 469 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 SPOPLQ6IQ16 392 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 ZNF557Q8N988 423 aaPredicted RBP12.09□□□□□ -0.47
CMTM1-216ENST00000533078 GANCQ8TET4 914 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 RNF139Q8WU17 664 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 CCDC47Q96A33 483 aaKnown RBP12.09□□□□□ -0.47
CMTM1-216ENST00000533078 NXPE2Q96DL1 559 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 PIWIL1Q96J94 861 aaKnown RBP12.09□□□□□ -0.47
CMTM1-216ENST00000533078 HEXIM2Q96MH2 286 aaKnown RBP12.09□□□□□ -0.47
CMTM1-216ENST00000533078 ACE2Q9BYF1 805 aaPredicted RBP12.09□□□□□ -0.47
CMTM1-216ENST00000533078 C6orf106Q9H6K1 298 aaPredicted RBP12.09□□□□□ -0.47
CMTM1-216ENST00000533078 SGK2Q9HBY8 427 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 TM9SF3Q9HD45 589 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 TOR4AQ9NXH8 423 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.09□□□□□ -0.47
CMTM1-216ENST00000533078 USP3Q9Y6I4 520 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 CKAP5Q14008 2032 aa12.09□□□□□ -0.47
CMTM1-216ENST00000533078 A0A087WV48 116 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 PDXKO00764 312 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 RRP8O43159 456 aaKnown RBP12.08□□□□□ -0.48
CMTM1-216ENST00000533078 RNASEH1O60930 286 aaKnown RBP12.08□□□□□ -0.48
CMTM1-216ENST00000533078 DKK1O94907 266 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 JUPP14923 745 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 ABCB4P21439 1286 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 CASP1P29466 404 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 ME1P48163 572 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 ST8SIA6P61647 398 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 YWHAGP61981 247 aaKnown RBP eCLIP12.08□□□□□ -0.48
CMTM1-216ENST00000533078 DLG4P78352 724 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 BNC1Q01954 994 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 PDE4CQ08493 712 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 CAMK2GQ13555 558 aaPredicted RBP12.08□□□□□ -0.48
CMTM1-216ENST00000533078 CUL4BQ13620 913 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 SHC4Q6S5L8 630 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 INTS8Q75QN2 995 aaKnown RBP12.08□□□□□ -0.48
CMTM1-216ENST00000533078 SCD5Q86SK9 330 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 TMPRSS12Q86WS5 348 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 AHI1Q8N157 1196 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 TMEM174Q8WUU8 243 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 SORCS1Q8WY21 1168 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 ARID3AQ99856 593 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 DMAC2Q9NW81 257 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 SUN2Q9UH99 717 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 BTBD3Q9Y2F9 522 aa12.08□□□□□ -0.48
CMTM1-216ENST00000533078 KNTC1P50748 2209 aa12.07□□□□□ -0.48
CMTM1-216ENST00000533078 ASXL3Q9C0F0 2248 aa12.07□□□□□ -0.48
CMTM1-216ENST00000533078 KALRNO60229 2985 aa12.07□□□□□ -0.48
CMTM1-216ENST00000533078 TYW5A2RUC4 315 aaKnown RBP12.07□□□□□ -0.48
CMTM1-216ENST00000533078 FAM149AA5PLN7 773 aa12.07□□□□□ -0.48
CMTM1-216ENST00000533078 SLFN14P0C7P3 912 aa12.07□□□□□ -0.48
CMTM1-216ENST00000533078 POLR2EP19388 210 aaKnown RBP12.07□□□□□ -0.48
CMTM1-216ENST00000533078 ACSL1P33121 698 aa12.07□□□□□ -0.48
CMTM1-216ENST00000533078 VAMP7P51809 220 aa12.07□□□□□ -0.48
CMTM1-216ENST00000533078 KMT5BQ4FZB7 885 aa12.07□□□□□ -0.48
CMTM1-216ENST00000533078 ZNF394Q53GI3 561 aa12.07□□□□□ -0.48
CMTM1-216ENST00000533078 PPP1R26Q5T8A7 1209 aaPredicted RBP12.07□□□□□ -0.48
CMTM1-216ENST00000533078 ZNF776Q68DI1 518 aaPredicted RBP12.07□□□□□ -0.48
CMTM1-216ENST00000533078 DHRS13Q6UX07 377 aa12.07□□□□□ -0.48
CMTM1-216ENST00000533078 CHST9Q7L1S5 443 aa12.07□□□□□ -0.48
CMTM1-216ENST00000533078 CCDC117Q8IWD4 279 aaPredicted RBP12.07□□□□□ -0.48
CMTM1-216ENST00000533078 C1orf216Q8TAB5 229 aa12.07□□□□□ -0.48
CMTM1-216ENST00000533078 BIRC7Q96CA5 298 aa12.07□□□□□ -0.48
CMTM1-216ENST00000533078 TMA16Q96EY4 203 aaKnown RBP12.07□□□□□ -0.48
CMTM1-216ENST00000533078 IPO9Q96P70 1041 aaKnown RBP12.07□□□□□ -0.48
CMTM1-216ENST00000533078 TWNKQ96RR1 684 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms