RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 NUP93Q8N1F7 819 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 ANKRD52Q8NB46 1076 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 TBC1D13Q9NVG8 400 aa15.73■□□□□ 0.11
PCDHA3-202ENST00000532566 RGPD5Q99666 1765 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 A0A0A0MRY4 1105 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 C2CD2LO14523 706 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 ATP6V1G2O95670 118 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 ESRRBO95718 433 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 TPH1P17752 444 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 AKT1P31749 480 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 PIGZQ86VD9 579 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 DAW1Q8N136 415 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 SPATA13Q96N96 652 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 LHX5Q9H2C1 402 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 TSPYL2Q9H2G4 693 aaPredicted RBP15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 EFCAB1Q9HAE3 211 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 CASS4Q9NQ75 786 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 BAZ2AQ9UIF9 1905 aaKnown RBP15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 MGEA5O60502 916 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 TSHRP16473 764 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 ICAM3P32942 547 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 ARL2P36404 184 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 BEX3Q00994 111 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 SPDYAQ5MJ70 313 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 ZBTB41Q5SVQ8 909 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 KCNMB4Q86W47 210 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 NTPCRQ9BSD7 190 aaKnown RBP15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 PRDM5Q9NQX1 630 aaPredicted RBP15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 SNX5Q9Y5X3 404 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 HOXA2O43364 376 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 RBP1P09455 135 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 ACADSP16219 412 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 NPR3P17342 541 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 MMRN1Q13201 1228 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 WSCD1Q658N2 575 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 MFN1Q8IWA4 741 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 JOSD2Q8TAC2 188 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 ZNF670Q9BS34 389 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 FBXO44Q9H4M3 255 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 NRDE2Q9H7Z3 1164 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 CYP4F12Q9HCS2 524 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 XPNPEP1Q9NQW7 623 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 TRMT6Q9UJA5 497 aaKnown RBP15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 MPOP05164 745 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 SERPINB5P36952 375 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 GRM5P41594 1212 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 RENBPP51606 427 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 CYTH1Q15438 398 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 PARP6Q2NL67 630 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 CCDC153Q494R4 210 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 TMEM154Q6P9G4 183 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 LRRC52Q8N7C0 313 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 WNK4Q96J92 1243 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 SH3GL2Q99962 352 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 CCDC134Q9H6E4 229 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 SLC24A3Q9HC58 644 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 GPAMQ9HCL2 828 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 NOCTQ9UK39 431 aaKnown RBP15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 PRDM4Q9UKN5 801 aa15.72■□□□□ 0.11
PCDHA3-202ENST00000532566 A0A096LPK6 155 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 CST3P01034 146 aaPredicted RBP15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 KRT16P08779 473 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 HADHBP55084 474 aaKnown RBP15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 CDH18Q13634 790 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 THEMIS2Q5TEJ8 643 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 CPNE1Q99829 537 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 ACSS3Q9H6R3 686 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 PDGFCQ9NRA1 345 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 MAFBQ9Y5Q3 323 aaPredicted RBP15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 ADGRA2Q96PE1 1338 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 E9PBE3 544 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 H0Y626 953 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 KLHL41O60662 606 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 TRIM13O60858 407 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 USP17L7P0C7H9 530 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 DRD4P21917 467 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 DNAJB2P25686 324 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 SERPINB3P29508 390 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 EEF1DP29692 281 aaKnown RBP15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 MMP13P45452 471 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 CD151P48509 253 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 ELAVL2Q12926 359 aaKnown RBP15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 CES3Q6UWW8 571 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 FUKQ8N0W3 1084 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 SERPINB11Q96P15 392 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 BCAS3Q9H6U6 928 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 WRAP73Q9P2S5 460 aaPredicted RBP15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 SLC13A4Q9UKG4 626 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 PCDHGB4Q9UN71 923 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 R3HDM2Q9Y2K5 976 aaKnown RBP15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 COQ4Q9Y3A0 265 aa15.71■□□□□ 0.11
PCDHA3-202ENST00000532566 ALOX15BO15296 676 aa15.71■□□□□ 0.1
PCDHA3-202ENST00000532566 SMIM10L2AP0DMW4 78 aa15.71■□□□□ 0.1
PCDHA3-202ENST00000532566 SMIM10L2BP0DMW5 78 aa15.71■□□□□ 0.1
PCDHA3-202ENST00000532566 KCNA4P22459 653 aa15.71■□□□□ 0.1
PCDHA3-202ENST00000532566 KCNK10P57789 538 aa15.71■□□□□ 0.1
PCDHA3-202ENST00000532566 POU4F1Q01851 419 aa15.71■□□□□ 0.1
PCDHA3-202ENST00000532566 NAB1Q13506 487 aa15.71■□□□□ 0.1
PCDHA3-202ENST00000532566 MON1BQ7L1V2 547 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms