RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 LRRC4Q9HBW1 653 aa13.39□□□□□ -0.27
TM9SF1-211ENST00000531406 OLA1Q9NTK5 396 aaKnown RBP13.39□□□□□ -0.27
TM9SF1-211ENST00000531406 HESX1Q9UBX0 185 aa13.39□□□□□ -0.27
TM9SF1-211ENST00000531406 ZMIZ1Q9ULJ6 1067 aa13.39□□□□□ -0.27
TM9SF1-211ENST00000531406 HBS1LQ9Y450 684 aaKnown RBP13.39□□□□□ -0.27
TM9SF1-211ENST00000531406 NEUROG3Q9Y4Z2 214 aa13.39□□□□□ -0.27
TM9SF1-211ENST00000531406 TMEM8BA6NDV4 472 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 KCNJ18B7U540 433 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 O00370 1275 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 TSPAN3O60637 253 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 GJB3O75712 270 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 VDRP11473 427 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 NCAM1P13591 858 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 HARS2P49590 506 aaKnown RBP13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 TPMTP51580 245 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 COPAP53621 1224 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 PMS1P54277 932 aaKnown RBP13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 YWHAEP62258 255 aaKnown RBP13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 ADIGQ0VDE8 80 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 LRMPQ12912 555 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 HNRNPDQ14103 355 aaKnown RBP13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 MPPE1Q53F39 396 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 ZNF658Q5TYW1 1059 aaPredicted RBP13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 BSPRYQ5W0U4 402 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 TMEM215Q68D42 235 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 UBR7Q8N806 425 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 CADM4Q8NFZ8 388 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 RNF139Q8WU17 664 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 EDEM1Q92611 657 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 PRCCQ92733 491 aaPredicted RBP13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 GSDMAQ96QA5 445 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 ARMCX3Q9UH62 379 aaPredicted RBP13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 STOML2Q9UJZ1 356 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 KIAA1257Q9ULG3 409 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 NFE2L3Q9Y4A8 694 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 NUP205Q92621 2012 aa13.38□□□□□ -0.27
TM9SF1-211ENST00000531406 PLXND1Q9Y4D7 1925 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 TNRC6BQ9UPQ9 1833 aaKnown RBP13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 A0A1B0GTW7 788 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 YJEFN3A6XGL0 299 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 MEI4A8MW99 385 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 E7ENQ6 273 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 H0Y626 953 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 SH3BP5O60239 455 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 SMC2O95347 1197 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 TRIM16O95361 564 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 IGLV3-19P01714 112 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 EPHX1P07099 455 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 SETSIPP0DME0 302 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 HOXD9P28356 352 aaPredicted RBP13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 ARID5AQ03989 594 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 GRIK2Q13002 908 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 SKOR2Q2VWA4 1001 aaPredicted RBP13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 LCLAT1Q6UWP7 414 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 SERPINA13PQ6UXR4 307 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 SIX6OS1Q8N1H7 587 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 KCTD13Q8WZ19 329 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 SLC35C1Q96A29 364 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 TMA16Q96EY4 203 aaKnown RBP13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 CAMK1GQ96NX5 476 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 NUP58Q9BVL2 599 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 ZDHHC5Q9C0B5 715 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 ABCC13Q9NSE7 274 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 LMBRD1Q9NUN5 540 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 SFMBT1Q9UHJ3 866 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 RALYQ9UKM9 306 aaKnown RBP13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 KLK13Q9UKR3 277 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 MSRB2Q9Y3D2 182 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 CFAP47Q6ZTR5 3102 aa13.37□□□□□ -0.27
TM9SF1-211ENST00000531406 AKAP13Q12802 2813 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 METTL12A8MUP2 240 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 GABBR2O75899 941 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 LATS1O95835 1130 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 ACADMP11310 421 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 HLA-EP13747 358 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 TBXAS1P24557 533 aaPredicted RBP13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 HLA-FP30511 346 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 RDXP35241 583 aaKnown RBP13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 ZNF445P59923 1031 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 LRRC63Q05C16 580 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 CAMK2GQ13555 558 aaPredicted RBP13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 TRIP6Q15654 476 aaKnown RBP13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 ZNF423Q2M1K9 1284 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 PKDCCQ504Y2 493 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 ADGRF1Q5T601 910 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 SCML4Q8N228 414 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 CHCHD4Q8N4Q1 142 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 ZCCHC9Q8N567 271 aaKnown RBP13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 ENGASEQ8NFI3 743 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 OR2T3Q8NH03 318 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 SPATA20Q8TB22 786 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 TFAP2BQ92481 460 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 MIR1-1HGQ9H1L0 117 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 CNGB3Q9NQW8 809 aa13.36□□□□□ -0.27
TM9SF1-211ENST00000531406 IGF2RP11717 2491 aa13.35□□□□□ -0.27
TM9SF1-211ENST00000531406 FAM221BA6H8Z2 402 aa13.35□□□□□ -0.27
TM9SF1-211ENST00000531406 TRIM49BA6NDI0 452 aa13.35□□□□□ -0.27
TM9SF1-211ENST00000531406 ZZEF1O43149 2961 aa13.35□□□□□ -0.27
TM9SF1-211ENST00000531406 MSI1O43347 362 aaKnown RBP13.35□□□□□ -0.27
TM9SF1-211ENST00000531406 PAEPP09466 180 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms