RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 USP34Q70CQ2 3546 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 NUP210Q8TEM1 1887 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-221ENST00000531068 SGK1O00141 431 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 GFRA2O00451 464 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 PES1O00541 588 aaKnown RBP11.45□□□□□ -0.58
CAPN1-221ENST00000531068 NPC1O15118 1278 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 GABBR2O75899 941 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 SKILP12757 684 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 NCAM1P13591 858 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 TGM1P22735 817 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 GNA15P30679 374 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 SLC11A2P49281 568 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 CCZ1BP86790 482 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 CCZ1P86791 482 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-221ENST00000531068 SPEM2Q0P670 501 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 PUM1Q14671 1186 aaKnown RBP eCLIP11.45□□□□□ -0.58
CAPN1-221ENST00000531068 ARHGAP44Q17R89 818 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 PLK5Q496M5 336 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 DNTTIP2Q5QJE6 756 aaKnown RBP11.45□□□□□ -0.58
CAPN1-221ENST00000531068 ADGRF1Q5T601 910 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 NUGGCQ68CJ6 796 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 MSANTD2Q6P1R3 559 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 DENND1BQ6P3S1 775 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 TMEM92Q6UXU6 159 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 TMEM110Q86TL2 294 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 KBTBD6Q86V97 674 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 SFTPA1Q8IWL2 248 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 SCUBE3Q8IX30 993 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 FAM217AQ8IXS0 508 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 CHPFQ8IZ52 775 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 PGBD3Q8N328 593 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 DDI1Q8WTU0 396 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 UCMAQ8WVF2 138 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 SHC3Q92529 594 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 BHMTQ93088 406 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 TMA16Q96EY4 203 aaKnown RBP11.45□□□□□ -0.58
CAPN1-221ENST00000531068 DDX50Q9BQ39 737 aaKnown RBP11.45□□□□□ -0.58
CAPN1-221ENST00000531068 SLC4A5Q9BY07 1137 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 EDEM3Q9BZQ6 932 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 MIS12Q9H081 205 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 GANQ9H2C0 597 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 PLCB1Q9NQ66 1216 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 PLK2Q9NYY3 685 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 BCCIPQ9P287 314 aaKnown RBP eCLIP11.45□□□□□ -0.58
CAPN1-221ENST00000531068 STOML2Q9UJZ1 356 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 DNAJC12Q9UKB3 198 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 CAPN11Q9UMQ6 739 aa11.45□□□□□ -0.58
CAPN1-221ENST00000531068 A0A1W2PQJ5 194 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 PIK3R2O00459 728 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 CAPN9O14815 690 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 TRIM24O15164 1050 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 IRAK2O43187 625 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 MAP3K13O43283 966 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 RRP9O43818 475 aaKnown RBP11.44□□□□□ -0.58
CAPN1-221ENST00000531068 ADAM23O75077 832 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 CALCAP01258 141 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 HNRNPLP14866 589 aaKnown RBP eCLIP11.44□□□□□ -0.58
CAPN1-221ENST00000531068 HNRNPH3P31942 346 aaKnown RBP11.44□□□□□ -0.58
CAPN1-221ENST00000531068 GBP1P32455 592 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 KRT9P35527 623 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 TBX4P57082 545 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 RING1Q06587 406 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 MPP7Q5T2T1 576 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 FYB2Q5VWT5 728 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 GJB7Q6PEY0 223 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 ERMP1Q7Z2K6 904 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 ZNF557Q8N988 423 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-221ENST00000531068 MDGA1Q8NFP4 955 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 BAP1Q92560 729 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 AZIN2Q96A70 460 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 FAM149B1Q96BN6 582 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 SPACA7Q96KW9 195 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 SERPINB11Q96P15 392 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 NOX5Q96PH1 765 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 NAA15Q9BXJ9 866 aaKnown RBP11.44□□□□□ -0.58
CAPN1-221ENST00000531068 DUSP15Q9H1R2 295 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-221ENST00000531068 LHX5Q9H2C1 402 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 CEP83Q9Y592 693 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 TICRRQ7Z2Z1 1910 aa11.44□□□□□ -0.58
CAPN1-221ENST00000531068 TCRBV21S2A2A0A5A6 115 aa11.43□□□□□ -0.58
CAPN1-221ENST00000531068 ANTXRLA6NF34 631 aa11.43□□□□□ -0.58
CAPN1-221ENST00000531068 PRRT4C9JH25 899 aa11.43□□□□□ -0.58
CAPN1-221ENST00000531068 FOXN3O00409 490 aaPredicted RBP11.43□□□□□ -0.58
CAPN1-221ENST00000531068 MFAP3LO75121 409 aa11.43□□□□□ -0.58
CAPN1-221ENST00000531068 EPN2O95208 641 aa11.43□□□□□ -0.58
CAPN1-221ENST00000531068 ZNF806P0C7X5 589 aa11.43□□□□□ -0.58
CAPN1-221ENST00000531068 CHRM1P11229 460 aaPredicted RBP11.43□□□□□ -0.58
CAPN1-221ENST00000531068 HOXB2P14652 356 aa11.43□□□□□ -0.58
CAPN1-221ENST00000531068 YWHAZP63104 245 aaKnown RBP11.43□□□□□ -0.58
CAPN1-221ENST00000531068 NNTQ13423 1086 aa11.43□□□□□ -0.58
CAPN1-221ENST00000531068 TRIM14Q14142 442 aa11.43□□□□□ -0.58
CAPN1-221ENST00000531068 EIF4HQ15056 248 aaKnown RBP11.43□□□□□ -0.58
CAPN1-221ENST00000531068 RSPO4Q2I0M5 234 aaPredicted RBP11.43□□□□□ -0.58
CAPN1-221ENST00000531068 SPDYCQ5MJ68 293 aa11.43□□□□□ -0.58
CAPN1-221ENST00000531068 FKBP15Q5T1M5 1219 aa11.43□□□□□ -0.58
CAPN1-221ENST00000531068 EGFLAMQ63HQ2 1017 aa11.43□□□□□ -0.58
CAPN1-221ENST00000531068 TOGARAM2Q6ZUX3 1019 aa11.43□□□□□ -0.58
CAPN1-221ENST00000531068 LPCAT2Q7L5N7 544 aa11.43□□□□□ -0.58
CAPN1-221ENST00000531068 CCDC117Q8IWD4 279 aaPredicted RBP11.43□□□□□ -0.58
CAPN1-221ENST00000531068 C12orf50Q8NA57 414 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms