RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 RAB41Q5JT25 222 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 DAB2IPQ5VWQ8 1189 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 ADGRD2Q7Z7M1 963 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 DDX42Q86XP3 938 aaKnown RBP eCLIP8.51□□□□□ -1.05
CMTM1-214ENST00000530141 NPAS4Q8IUM7 802 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 SPATA2LQ8IUW3 424 aaPredicted RBP8.51□□□□□ -1.05
CMTM1-214ENST00000530141 CDKL3Q8IVW4 592 aaPredicted RBP8.51□□□□□ -1.05
CMTM1-214ENST00000530141 ARHGAP18Q8N392 663 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 FBXL6Q8N531 539 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 ARFGAP2Q8N6H7 521 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 ARFGAP1Q8N6T3 406 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 TSEN2Q8NCE0 465 aaKnown RBP8.51□□□□□ -1.05
CMTM1-214ENST00000530141 DBF4BQ8NFT6 615 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 FAM76AQ8TAV0 307 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 SLC35B2Q8TB61 432 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 FBXO25Q8TCJ0 367 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 ATG4AQ8WYN0 398 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 P3H4Q92791 437 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 MYLPFQ96A32 169 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 EXOC4Q96A65 974 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 PGAP3Q96FM1 320 aaPredicted RBP8.51□□□□□ -1.05
CMTM1-214ENST00000530141 PCED1BQ96HM7 432 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 FUBP3Q96I24 572 aaKnown RBP eCLIP8.51□□□□□ -1.05
CMTM1-214ENST00000530141 GDAP1L1Q96MZ0 367 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 ZIM3Q96PE6 472 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 RNF157Q96PX1 679 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 HINFPQ9BQA5 517 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 CCDC77Q9BR77 488 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 C11orf84Q9BUA3 381 aaPredicted RBP8.51□□□□□ -1.05
CMTM1-214ENST00000530141 PRKD2Q9BZL6 878 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 FAM117AQ9C073 453 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 SLC6A16Q9GZN6 736 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 PABPC3Q9H361 631 aaKnown RBP8.51□□□□□ -1.05
CMTM1-214ENST00000530141 PLEKHA4Q9H4M7 779 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 CRTAC1Q9NQ79 661 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 KLHL11Q9NVR0 708 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 PSD3Q9NYI0 1048 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 GRHL1Q9NZI5 618 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 VPS18Q9P253 973 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 PRKAG3Q9UGI9 489 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 FAM153AQ9UHL3 310 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 PLAAQ9Y263 795 aa8.51□□□□□ -1.05
CMTM1-214ENST00000530141 R3HDM2Q9Y2K5 976 aaKnown RBP8.51□□□□□ -1.05
CMTM1-214ENST00000530141 PTPRZ1P23471 2315 aaPredicted RBP8.51□□□□□ -1.05
CMTM1-214ENST00000530141 ABHD14A-ACY1A0A1B0GW23 586 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 GOLGA6CA6NDK9 693 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 HACD1B0YJ81 288 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 H3BNC9 293 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 H3BQF6 201 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 H7C4K7 107 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 PIK3R2O00459 728 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 CLDN5O00501 218 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 DNALI1O14645 258 aaPredicted RBP8.5□□□□□ -1.05
CMTM1-214ENST00000530141 EIF3HO15372 352 aaKnown RBP eCLIP8.5□□□□□ -1.05
CMTM1-214ENST00000530141 GRAP2O75791 330 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 OAZ2O95190 189 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 IVLP07476 585 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 NUDT17P0C025 328 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 GOLGA6DP0CG33 693 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 KRT10P13645 584 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 TCF4P15884 667 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 IBSPP21815 317 aaPredicted RBP8.5□□□□□ -1.05
CMTM1-214ENST00000530141 ATP5DP30049 168 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 CTNNB1P35222 781 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 SCN1AP35498 2009 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 OR1G1P47890 313 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 NR2C2P49116 596 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 ARSEP51690 589 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 ITGA8P53708 1063 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 BCAR1P56945 870 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 DAOAP59103 153 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 EIF3EP60228 445 aaKnown RBP8.5□□□□□ -1.05
CMTM1-214ENST00000530141 HTRA4P83105 476 aaPredicted RBP8.5□□□□□ -1.05
CMTM1-214ENST00000530141 ZXDAP98168 799 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 OTUD4Q01804 1114 aaKnown RBP8.5□□□□□ -1.05
CMTM1-214ENST00000530141 DEUP1Q05D60 604 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 ADCY2Q08462 1091 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 ADCY1Q08828 1119 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 XRCC4Q13426 336 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 IKBKEQ14164 716 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 DPYSL3Q14195 570 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 COL19A1Q14993 1142 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 NOMO1Q15155 1222 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 OASLQ15646 514 aaKnown RBP8.5□□□□□ -1.05
CMTM1-214ENST00000530141 C15orf59Q2T9L4 293 aaPredicted RBP8.5□□□□□ -1.05
CMTM1-214ENST00000530141 KCNT1Q5JUK3 1230 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 AGBL2Q5U5Z8 902 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 IZUMO3Q5VZ72 239 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 TXNRD3NBQ6F5E7 133 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 VSTM1Q6UX27 236 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 ZDHHC24Q6UX98 284 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 PPP1R21Q6ZMI0 780 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 PAQR9Q6ZVX9 377 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 RELL1Q8IUW5 271 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 COLGALT2Q8IYK4 626 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 DEFB106AQ8N104 65 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 C3orf58Q8NDZ4 430 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 C2orf15Q8WU43 125 aaKnown RBP8.5□□□□□ -1.05
CMTM1-214ENST00000530141 NTAN1Q96AB6 310 aa8.5□□□□□ -1.05
CMTM1-214ENST00000530141 FAF2Q96CS3 445 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms