RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 PSMD6Q15008 389 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 SURF1Q15526 300 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 QPCTQ16769 361 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 TUSC1Q2TAM9 212 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 ZNF658Q5TYW1 1059 aaPredicted RBP9□□□□□ -0.97
TGFBR3-208ENST00000529608 SLC36A4Q6YBV0 504 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 CCNI2Q6ZMN8 369 aaPredicted RBP9□□□□□ -0.97
TGFBR3-208ENST00000529608 TPGS1Q6ZTW0 290 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 HTR3DQ70Z44 454 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 DDX42Q86XP3 938 aaKnown RBP eCLIP9□□□□□ -0.97
TGFBR3-208ENST00000529608 NAXDQ8IW45 347 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 CHPFQ8IZ52 775 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 CCDC112Q8NEF3 446 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 ZNF507Q8TCN5 953 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 OVCA2Q8WZ82 227 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 OTUB2Q96DC9 234 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 CRELD1Q96HD1 420 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 DUSP9Q99956 384 aaKnown RBP9□□□□□ -0.97
TGFBR3-208ENST00000529608 KLF16Q9BXK1 252 aaPredicted RBP9□□□□□ -0.97
TGFBR3-208ENST00000529608 LRRC27Q9C0I9 530 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 NMUR1Q9HB89 426 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 AGPAT3Q9NRZ7 376 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 DNAJC17Q9NVM6 304 aaKnown RBP9□□□□□ -0.97
TGFBR3-208ENST00000529608 KBTBD4Q9NVX7 518 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 TOR4AQ9NXH8 423 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 EHD2Q9NZN4 543 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 HMGXB4Q9UGU5 601 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 RWDD2AQ9UIY3 292 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 NUDT5Q9UKK9 219 aa9□□□□□ -0.97
TGFBR3-208ENST00000529608 CKAP5Q14008 2032 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 CFAP99D6REC4 459 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 KIAA0391O15091 583 aaKnown RBP8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 CCP110O43303 1012 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 CACNG3O60359 315 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 TLR5O60602 858 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 RTN3O95197 1032 aaPredicted RBP8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 VNN1O95497 513 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 STAU1O95793 577 aaKnown RBP8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 RPN1P04843 607 aaKnown RBP8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 ATP1A3P13637 1013 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 DPP6P42658 865 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 CYP2J2P51589 502 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 TNNC1P63316 161 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 EHHADHQ08426 723 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 LRMPQ12912 555 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 STIM1Q13586 685 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 LAPTM4AQ15012 233 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 ZNF423Q2M1K9 1284 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 PLEKHG6Q3KR16 790 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 FILIP1LQ4L180 1135 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 BTBD8Q5XKL5 378 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 GRAMD4Q6IC98 578 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 SCARA5Q6ZMJ2 495 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 ACOT1Q86TX2 421 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 PDZD3Q86UT5 571 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 VSTM4Q8IW00 320 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 NELFCDQ8IXH7 590 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 CCDC65Q8IXS2 484 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 RGL4Q8IZJ4 473 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 PDZD8Q8NEN9 1154 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 SCFD1Q8WVM8 642 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 BHMTQ93088 406 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 BBS2Q9BXC9 721 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 MKRN2Q9H000 416 aaKnown RBP8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 KRT82Q9NSB4 513 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 PLK2Q9NYY3 685 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 MARK1Q9P0L2 795 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 PCOLCE2Q9UKZ9 415 aa8.99□□□□□ -0.97
TGFBR3-208ENST00000529608 PLXNA2O75051 1894 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 IGSF10Q6WRI0 2623 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 LRRIQ3A6PVS8 624 aaPredicted RBP8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 HHLA1C9JL84 531 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 KIF2AO00139 706 aaPredicted RBP8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 ZNF217O75362 1048 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 AP1G2O75843 785 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 ZIC2O95409 532 aaPredicted RBP8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 KLKB1P03952 638 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 SYPP08247 313 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 FAM163BP0C2L3 166 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 IL12RB1P42701 662 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 TUBP50607 506 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 MAP3K7CLP57077 242 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 DLG4P78352 724 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 CCZ1BP86790 482 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 CCZ1P86791 482 aaPredicted RBP8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 SLC14A1Q13336 389 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 NR1I3Q14994 352 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 TPD52L1Q16890 204 aaPredicted RBP8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 GEN1Q17RS7 908 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 FUT11Q495W5 492 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 CDKAL1Q5VV42 579 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 DESI1Q6ICB0 168 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 KIAA1324Q6UXG2 1013 aaKnown RBP8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 TRMT11Q7Z4G4 463 aaKnown RBP8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 ZCCHC9Q8N567 271 aaKnown RBP8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 C12orf29Q8N999 325 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 ANKRD20A12PQ8NF67 263 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 BAHD1Q8TBE0 780 aaPredicted RBP8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 SLC2A14Q8TDB8 520 aa8.98□□□□□ -0.97
TGFBR3-208ENST00000529608 HNRNPLLQ8WVV9 542 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms