RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.64□□□□□ -1.83
BRCA2-203ENST00000528762 LRRC71Q8N4P6 559 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 METTL25Q8N6Q8 603 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 CCDC89Q8N998 374 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 FSIP1Q8NA03 581 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 B3GALNT2Q8NCR0 500 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 CPEB3Q8NE35 698 aaKnown RBP3.64□□□□□ -1.83
BRCA2-203ENST00000528762 NGDNQ8NEJ9 315 aaKnown RBP3.64□□□□□ -1.83
BRCA2-203ENST00000528762 SUPT20HQ8NEM7 779 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 NTN5Q8WTR8 489 aaPredicted RBP3.64□□□□□ -1.83
BRCA2-203ENST00000528762 UCMAQ8WVF2 138 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 ST8SIA4Q92187 359 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 STAMQ92783 540 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 VOPP1Q96AW1 172 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 RSPRY1Q96DX4 576 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 PTCD3Q96EY7 689 aaKnown RBP3.64□□□□□ -1.83
BRCA2-203ENST00000528762 VPS50Q96JG6 964 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 SERHL2Q9H4I8 314 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 CYP4F11Q9HBI6 524 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 SMYD2Q9NRG4 433 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 RXFP3Q9NSD7 469 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 OLA1Q9NTK5 396 aaKnown RBP3.64□□□□□ -1.83
BRCA2-203ENST00000528762 FBXO28Q9NVF7 368 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 PTGFRNQ9P2B2 879 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 POLG2Q9UHN1 485 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 ARHGAP26Q9UNA1 814 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 DNAJC16Q9Y2G8 782 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 ZBTB1Q9Y2K1 713 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 AFG3L2Q9Y4W6 797 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 PCDHA10Q9Y5I2 948 aa3.64□□□□□ -1.83
BRCA2-203ENST00000528762 PCSK5Q92824 1860 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 TBC1D3DA0A087WVF3 549 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 TBC1D3IA0A087WXS9 549 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 TBC1D3EA0A087X179 549 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 TBC1D3KA0A087X1G2 549 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 TBC1D3BA6NDS4 549 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 TBC1D3FA6NER0 549 aaPredicted RBP3.63□□□□□ -1.83
BRCA2-203ENST00000528762 TBC1D3LB9A6J9 549 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 STX16-NPEPL1H3BU86 382 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 K7ENM7 598 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 STX16O14662 325 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 ZNF500O60304 480 aaPredicted RBP3.63□□□□□ -1.83
BRCA2-203ENST00000528762 USO1O60763 962 aaKnown RBP3.63□□□□□ -1.83
BRCA2-203ENST00000528762 CDKL5O76039 1030 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 VNN1O95497 513 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 ONECUT2O95948 504 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 ERBB2P04626 1255 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 PDHA1P08559 390 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 CSF1P09603 554 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 TBC1D3HP0C7X1 549 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 PPP3CBP16298 524 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 PGM1P36871 562 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 LIPAP38571 399 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 ITIH3Q06033 890 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 PDCLQ13371 301 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 BFSP2Q13515 415 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 DCTN1Q14203 1278 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 TBCCQ15814 346 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 BAK1Q16611 211 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 ST3GAL2Q16842 350 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 CCDC142Q17RM4 750 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 BEAN1Q3B7T3 259 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 CCDC30Q5VVM6 783 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 TBC1D3GQ6DHY5 549 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 DGAT2L7PQ6IED9 249 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 TBC1D3CQ6IPX1 549 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 ANO7Q6IWH7 933 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 FASTKD5Q7L8L6 764 aaKnown RBP3.63□□□□□ -1.83
BRCA2-203ENST00000528762 TBC1D3Q8IZP1 549 aaPredicted RBP3.63□□□□□ -1.83
BRCA2-203ENST00000528762 GALNT4Q8N4A0 578 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 ANKRD44Q8N8A2 993 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 ANKRD52Q8NB46 1076 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 XAGE5Q8WWM1 108 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 ZUFSPQ96AP4 578 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 KTI12Q96EK9 354 aaPredicted RBP3.63□□□□□ -1.83
BRCA2-203ENST00000528762 RSRC1Q96IZ7 334 aaKnown RBP3.63□□□□□ -1.83
BRCA2-203ENST00000528762 PGBD1Q96JS3 809 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 C7orf26Q96N11 449 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 BBC3Q96PG8 261 aaPredicted RBP3.63□□□□□ -1.83
BRCA2-203ENST00000528762 TREX2Q9BQ50 279 aaPredicted RBP3.63□□□□□ -1.83
BRCA2-203ENST00000528762 SYNPO2LQ9H987 977 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 RMI1Q9H9A7 625 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 PLEKHA5Q9HAU0 1116 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 PLEKHA2Q9HB19 425 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 MGAT4CQ9UBM8 478 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 AASSQ9UDR5 926 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 ASAP1Q9ULH1 1129 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 SLC12A4Q9UP95 1085 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 CYP46A1Q9Y6A2 500 aa3.63□□□□□ -1.83
BRCA2-203ENST00000528762 LOC105369274A0A096LPK9 316 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 LOC102723532A0A0G2JNH3 316 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 VWA3AA6NCI4 1184 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 A8MVJ9 347 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 KLK10O43240 276 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 HNRNPRO43390 633 aaKnown RBP3.62□□□□□ -1.83
BRCA2-203ENST00000528762 ANP32CO43423 234 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 PMPCBO75439 489 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 TMEM63AO94886 807 aa3.62□□□□□ -1.83
BRCA2-203ENST00000528762 HNRNPA1P09651 372 aaKnown RBP eCLIP3.62□□□□□ -1.83
BRCA2-203ENST00000528762 CREB1P16220 341 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms