RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 ENAHQ8N8S7 591 aaPredicted RBP6.65□□□□□ -1.34
PCF11-202ENST00000528336 PAGR1Q9BTK6 254 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 ZNF69Q9UC07 566 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 FZD4Q9ULV1 537 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 SYNJ1O43426 1573 aa6.65□□□□□ -1.35
PCF11-202ENST00000528336 BIVM-ERCC5R4GMW8 1640 aa6.65□□□□□ -1.35
PCF11-202ENST00000528336 CHRM5P08912 532 aaPredicted RBP6.64□□□□□ -1.35
PCF11-202ENST00000528336 CYP2A6P11509 494 aaPredicted RBP6.64□□□□□ -1.35
PCF11-202ENST00000528336 ATF7P17544 494 aaPredicted RBP6.64□□□□□ -1.35
PCF11-202ENST00000528336 MMP8P22894 467 aa6.64□□□□□ -1.35
PCF11-202ENST00000528336 MPGP29372 298 aa6.64□□□□□ -1.35
PCF11-202ENST00000528336 IGHMBP2P38935 993 aaKnown RBP6.64□□□□□ -1.35
PCF11-202ENST00000528336 JAK3P52333 1124 aa6.64□□□□□ -1.35
PCF11-202ENST00000528336 GALNT1Q10472 559 aaPredicted RBP6.64□□□□□ -1.35
PCF11-202ENST00000528336 SLC10A2Q12908 348 aaPredicted RBP6.64□□□□□ -1.35
PCF11-202ENST00000528336 LARS2Q15031 903 aaKnown RBP6.64□□□□□ -1.35
PCF11-202ENST00000528336 ZACNQ401N2 412 aa6.64□□□□□ -1.35
PCF11-202ENST00000528336 RINT1Q6NUQ1 792 aa6.64□□□□□ -1.35
PCF11-202ENST00000528336 MSANTD2Q6P1R3 559 aa6.64□□□□□ -1.35
PCF11-202ENST00000528336 CCDC174Q6PII3 467 aa6.64□□□□□ -1.35
PCF11-202ENST00000528336 VSTM1Q6UX27 236 aa6.64□□□□□ -1.35
PCF11-202ENST00000528336 GATAD2AQ86YP4 633 aa6.64□□□□□ -1.35
PCF11-202ENST00000528336 FAM71BQ8TC56 605 aa6.64□□□□□ -1.35
PCF11-202ENST00000528336 OVCA2Q8WZ82 227 aa6.64□□□□□ -1.35
PCF11-202ENST00000528336 KAZALD1Q96I82 304 aa6.64□□□□□ -1.35
PCF11-202ENST00000528336 C5orf34Q96MH7 638 aa6.64□□□□□ -1.35
PCF11-202ENST00000528336 SH2D3AQ9BRG2 576 aa6.64□□□□□ -1.35
PCF11-202ENST00000528336 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.64□□□□□ -1.35
PCF11-202ENST00000528336 PCDHB7Q9Y5E2 793 aa6.64□□□□□ -1.35
PCF11-202ENST00000528336 SOGA1O94964 1423 aa6.64□□□□□ -1.35
PCF11-202ENST00000528336 CCDC187A0A096LP49 1063 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 TMEM232C9JQI7 657 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 H3BNC9 293 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 M0QZQ0 153 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 FCHO1O14526 889 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 CTIFO43310 598 aaKnown RBP6.63□□□□□ -1.35
PCF11-202ENST00000528336 DHHO43323 396 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 CER1O95813 267 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 MBPP02686 304 aaPredicted RBP6.63□□□□□ -1.35
PCF11-202ENST00000528336 ITGA5P08648 1049 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 COPB2P35606 906 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 SRSF4Q08170 494 aaKnown RBP6.63□□□□□ -1.35
PCF11-202ENST00000528336 SLC14A1Q13336 389 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 TARBP1Q13395 1621 aaKnown RBP6.63□□□□□ -1.35
PCF11-202ENST00000528336 PTK2BQ14289 1009 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 CCDC38Q502W7 563 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 INO80DQ53TQ3 878 aaPredicted RBP6.63□□□□□ -1.35
PCF11-202ENST00000528336 TMEM63BQ5T3F8 832 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 SYCE2Q6PIF2 218 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 RANBP10Q6VN20 620 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 ZNF66Q6ZN08 573 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 C16orf71Q8IYS4 520 aaPredicted RBP6.63□□□□□ -1.35
PCF11-202ENST00000528336 SLC22A17Q8WUG5 538 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 MCRS1Q96EZ8 462 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 FBXO28Q9NVF7 368 aa6.63□□□□□ -1.35
PCF11-202ENST00000528336 RAD54L2Q9Y4B4 1467 aa6.62□□□□□ -1.35
PCF11-202ENST00000528336 WIPF3A6NGB9 483 aa6.62□□□□□ -1.35
PCF11-202ENST00000528336 TRIM38O00635 465 aa6.62□□□□□ -1.35
PCF11-202ENST00000528336 GYS1P13807 737 aa6.62□□□□□ -1.35
PCF11-202ENST00000528336 TRAPPC10P48553 1259 aa6.62□□□□□ -1.35
PCF11-202ENST00000528336 WDR5P61964 334 aaKnown RBP6.62□□□□□ -1.35
PCF11-202ENST00000528336 POU5F1Q01860 360 aaKnown RBP6.62□□□□□ -1.35
PCF11-202ENST00000528336 TRIM71Q2Q1W2 868 aaKnown RBP6.62□□□□□ -1.35
PCF11-202ENST00000528336 NRSN1Q8IZ57 195 aa6.62□□□□□ -1.35
PCF11-202ENST00000528336 WDR60Q8WVS4 1066 aa6.62□□□□□ -1.35
PCF11-202ENST00000528336 EFHD1Q9BUP0 239 aa6.62□□□□□ -1.35
PCF11-202ENST00000528336 TMX4Q9H1E5 349 aaPredicted RBP6.62□□□□□ -1.35
PCF11-202ENST00000528336 ABHD10Q9NUJ1 306 aa6.62□□□□□ -1.35
PCF11-202ENST00000528336 GAR1Q9NY12 217 aaKnown RBP6.62□□□□□ -1.35
PCF11-202ENST00000528336 LZTS1Q9Y250 596 aa6.62□□□□□ -1.35
PCF11-202ENST00000528336 HEMK1Q9Y5R4 338 aaPredicted RBP6.62□□□□□ -1.35
PCF11-202ENST00000528336 ZNF608Q9ULD9 1512 aaPredicted RBP6.61□□□□□ -1.35
PCF11-202ENST00000528336 KAT6BQ8WYB5 2073 aa6.61□□□□□ -1.35
PCF11-202ENST00000528336 EPB41L2O43491 1005 aaKnown RBP6.61□□□□□ -1.35
PCF11-202ENST00000528336 CSTBP04080 98 aaKnown RBP6.61□□□□□ -1.35
PCF11-202ENST00000528336 BLMHQ13867 455 aa6.61□□□□□ -1.35
PCF11-202ENST00000528336 CNGA3Q16281 694 aa6.61□□□□□ -1.35
PCF11-202ENST00000528336 CEP78Q5JTW2 689 aa6.61□□□□□ -1.35
PCF11-202ENST00000528336 ACSM6Q6P461 480 aa6.61□□□□□ -1.35
PCF11-202ENST00000528336 OR1N1Q8NGS0 311 aa6.61□□□□□ -1.35
PCF11-202ENST00000528336 RMDN3Q96TC7 470 aa6.61□□□□□ -1.35
PCF11-202ENST00000528336 TP63Q9H3D4 680 aaPredicted RBP6.61□□□□□ -1.35
PCF11-202ENST00000528336 ADARB2Q9NS39 739 aaKnown RBP6.61□□□□□ -1.35
PCF11-202ENST00000528336 ABCA10Q8WWZ4 1543 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 TIMM44O43615 452 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 RPP40O75818 363 aaKnown RBP6.6□□□□□ -1.35
PCF11-202ENST00000528336 SLC3A2P08195 630 aaKnown RBP6.6□□□□□ -1.35
PCF11-202ENST00000528336 DUSP1P28562 367 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 CHKAP35790 457 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 SERPINF1P36955 418 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 VPS41P49754 854 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 KPNB1Q14974 876 aaKnown RBP6.6□□□□□ -1.35
PCF11-202ENST00000528336 PFKFB3Q16875 520 aaPredicted RBP6.6□□□□□ -1.35
PCF11-202ENST00000528336 BTBD16Q32M84 506 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 TUBB8Q3ZCM7 444 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 FAM83BQ5T0W9 1011 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 ANKRD40Q6AI12 368 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 C16orf89Q6UX73 402 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 C8orf58Q8NAV2 365 aa6.6□□□□□ -1.35
PCF11-202ENST00000528336 OR52L2PQ8NGH6 319 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms