RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 USP39Q53GS9 565 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 C11orf74Q86VG3 221 aa12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 DCLK2Q8N568 766 aa12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 ZNF557Q8N988 423 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 TMEM35BQ8NCS4 154 aa12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 C1orf131Q8NDD1 294 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 ZNF397Q8NF99 534 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 UCMAQ8WVF2 138 aa12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 DDX1Q92499 740 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 BHMTQ93088 406 aa12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 FCRL2Q96LA5 508 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 SLC2A13Q96QE2 648 aa12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 HSD3B7Q9H2F3 369 aa12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 PDCL3Q9H2J4 239 aa12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 SIK3Q9Y2K2 1263 aa12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 PLXND1Q9Y4D7 1925 aa12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 SMTNL1A8MU46 457 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 LGALS16A8MUM7 142 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 HSF2BPO75031 334 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 LSM8O95777 96 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 TRUB2O95900 331 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 HOXD9P28356 352 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 GABRB2P47870 512 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 JAM2P57087 298 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 CDK17Q00537 523 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 SLC6A3Q01959 620 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 BYSLQ13895 437 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 PIK3R6Q5UE93 754 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 EGFLAMQ63HQ2 1017 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 RNF43Q68DV7 783 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 ANO7Q6IWH7 933 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 TAC4Q86UU9 113 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 ZNF677Q86XU0 584 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 PASD1Q8IV76 773 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 CHPFQ8IZ52 775 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 FAM160A2Q8N612 972 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 IPO4Q8TEX9 1081 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 ERGIC2Q96RQ1 377 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 GABRG3Q99928 467 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 TMEM51Q9NW97 253 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 TJP2Q9UDY2 1190 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 VPS13AQ96RL7 3174 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 THADAQ6YHU6 1953 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 USP34Q70CQ2 3546 aa12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 EP300Q09472 2414 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-209ENST00000528230 ZBTB24O43167 697 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 TSPAN3O60637 253 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 RHOBTB1O94844 696 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 APOEP02649 317 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 ERBB2P04626 1255 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 SLC2A3P11169 496 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 HOXB2P14652 356 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 PTMSP20962 102 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 TGM1P22735 817 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 GBP1P32455 592 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 SOX5P35711 763 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 SCNN1AP37088 669 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 POLR2FP61218 127 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 UBXN1Q04323 297 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 MTA1Q13330 715 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 ENPP2Q13822 863 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 SYCP1Q15431 976 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 TAF5Q15542 800 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 LPAL2Q16609 132 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 GEN1Q17RS7 908 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 KLHL40Q2TBA0 621 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 PTPN20Q4JDL3 420 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 ANO6Q4KMQ2 910 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 DCAF6Q58WW2 860 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 FAM133BQ5BKY9 247 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 OR6B2Q6IFH4 312 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 CAVIN1Q6NZI2 390 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 OLFML1Q6UWY5 402 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 FAM183BPQ6ZVS7 135 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 SLC26A9Q7LBE3 791 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 APTXQ7Z2E3 356 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 ANKS1BQ7Z6G8 1248 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 KIAA0907Q7Z7F0 614 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 NOP9Q86U38 636 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 KBTBD6Q86V97 674 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 ERICH1Q86X53 443 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 DEFB106AQ8N104 65 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 MDGA1Q8NFP4 955 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 NEK11Q8NG66 645 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 OLIG1Q8TAK6 271 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 WFIKKN2Q8TEU8 576 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 C18orf8Q96DM3 657 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 BTN2A3PQ96KV6 586 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 ACOX2Q99424 681 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 SYNCQ9H7C4 482 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 ZDHHC4Q9NPG8 344 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 FAM207AQ9NSI2 230 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 ELOVL2Q9NXB9 296 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 RRN3Q9NYV6 651 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 THAP10Q9P2Z0 257 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 SLC12A6Q9UHW9 1150 aa12.58□□□□□ -0.4
TRAPPC4-209ENST00000528230 CLEC4EQ9ULY5 219 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms