RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 RSRC2Q7L4I2 434 aaKnown RBP24.67■■□□□ 1.54
CPSF1-202ENST00000527827 BHLHA9Q7RTU4 235 aa24.67■■□□□ 1.54
CPSF1-202ENST00000527827 GLRX5Q86SX6 157 aa24.67■■□□□ 1.54
CPSF1-202ENST00000527827 CACUL1Q86Y37 369 aa24.67■■□□□ 1.54
CPSF1-202ENST00000527827 GUF1Q8N442 669 aaKnown RBP24.67■■□□□ 1.54
CPSF1-202ENST00000527827 C1orf216Q8TAB5 229 aa24.67■■□□□ 1.54
CPSF1-202ENST00000527827 DDI1Q8WTU0 396 aa24.67■■□□□ 1.54
CPSF1-202ENST00000527827 ARID3AQ99856 593 aa24.67■■□□□ 1.54
CPSF1-202ENST00000527827 NUP58Q9BVL2 599 aa24.67■■□□□ 1.54
CPSF1-202ENST00000527827 NBEAQ8NFP9 2946 aa24.67■■□□□ 1.54
CPSF1-202ENST00000527827 MUC22E2RYF6 1773 aaPredicted RBP24.67■■□□□ 1.54
CPSF1-202ENST00000527827 ADAMTS20P59510 1910 aa24.67■■□□□ 1.54
CPSF1-202ENST00000527827 BCAT2O15382 392 aaPredicted RBP24.66■■□□□ 1.54
CPSF1-202ENST00000527827 EPHX1P07099 455 aa24.66■■□□□ 1.54
CPSF1-202ENST00000527827 ZNF883P0CG24 379 aa24.66■■□□□ 1.54
CPSF1-202ENST00000527827 RPL13P26373 211 aaKnown RBP24.66■■□□□ 1.54
CPSF1-202ENST00000527827 TKTL1P51854 596 aa24.66■■□□□ 1.54
CPSF1-202ENST00000527827 E2F5Q15329 346 aa24.66■■□□□ 1.54
CPSF1-202ENST00000527827 TRIP4Q15650 581 aaPredicted RBP24.66■■□□□ 1.54
CPSF1-202ENST00000527827 PM20D1Q6GTS8 502 aa24.66■■□□□ 1.54
CPSF1-202ENST00000527827 SLCO6A1Q86UG4 719 aa24.66■■□□□ 1.54
CPSF1-202ENST00000527827 HSCBQ8IWL3 235 aa24.66■■□□□ 1.54
CPSF1-202ENST00000527827 TTC39CQ8N584 583 aa24.66■■□□□ 1.54
CPSF1-202ENST00000527827 ANKRD52Q8NB46 1076 aa24.66■■□□□ 1.54
CPSF1-202ENST00000527827 SPRYD3Q8NCJ5 442 aa24.66■■□□□ 1.54
CPSF1-202ENST00000527827 NDRG1Q92597 394 aaKnown RBP24.66■■□□□ 1.54
CPSF1-202ENST00000527827 PLD4Q96BZ4 506 aa24.66■■□□□ 1.54
CPSF1-202ENST00000527827 GAREM1Q9H706 876 aa24.66■■□□□ 1.54
CPSF1-202ENST00000527827 EIF2B4Q9UI10 523 aaKnown RBP24.66■■□□□ 1.54
CPSF1-202ENST00000527827 FNDC3AQ9Y2H6 1198 aaKnown RBP24.66■■□□□ 1.54
CPSF1-202ENST00000527827 ITPR1Q14643 2758 aa24.65■■□□□ 1.54
CPSF1-202ENST00000527827 FAM237AA0A1B0GTK4 181 aa24.65■■□□□ 1.54
CPSF1-202ENST00000527827 TULP2O00295 520 aa24.65■■□□□ 1.54
CPSF1-202ENST00000527827 TIMM44O43615 452 aa24.65■■□□□ 1.54
CPSF1-202ENST00000527827 ACADMP11310 421 aa24.65■■□□□ 1.54
CPSF1-202ENST00000527827 HLA-EP13747 358 aa24.65■■□□□ 1.54
CPSF1-202ENST00000527827 SYKP43405 635 aa24.65■■□□□ 1.54
CPSF1-202ENST00000527827 NDUFA8P51970 172 aa24.65■■□□□ 1.54
CPSF1-202ENST00000527827 SERPINA13PQ6UXR4 307 aa24.65■■□□□ 1.54
CPSF1-202ENST00000527827 CCNI2Q6ZMN8 369 aaPredicted RBP24.65■■□□□ 1.54
CPSF1-202ENST00000527827 FBXL13Q8NEE6 735 aa24.65■■□□□ 1.54
CPSF1-202ENST00000527827 TATDN2Q93075 761 aa24.65■■□□□ 1.54
CPSF1-202ENST00000527827 CCDC47Q96A33 483 aaKnown RBP24.65■■□□□ 1.54
CPSF1-202ENST00000527827 ULBP1Q9BZM6 244 aa24.65■■□□□ 1.54
CPSF1-202ENST00000527827 RAB20Q9NX57 234 aa24.65■■□□□ 1.54
CPSF1-202ENST00000527827 APOBEC2Q9Y235 224 aaKnown RBP24.65■■□□□ 1.54
CPSF1-202ENST00000527827 SLCO1B1Q9Y6L6 691 aa24.65■■□□□ 1.54
CPSF1-202ENST00000527827 CABIN1Q9Y6J0 2220 aa24.65■■□□□ 1.54
CPSF1-202ENST00000527827 ZBED1O96006 694 aa24.64■■□□□ 1.54
CPSF1-202ENST00000527827 HOXD9P28356 352 aaPredicted RBP24.64■■□□□ 1.54
CPSF1-202ENST00000527827 MATKP42679 507 aa24.64■■□□□ 1.54
CPSF1-202ENST00000527827 MXI1P50539 228 aa24.64■■□□□ 1.54
CPSF1-202ENST00000527827 CAMK2GQ13555 558 aaPredicted RBP24.64■■□□□ 1.54
CPSF1-202ENST00000527827 HLA-BQ31612 363 aa24.64■■□□□ 1.54
CPSF1-202ENST00000527827 FAM124AQ86V42 546 aa24.64■■□□□ 1.54
CPSF1-202ENST00000527827 OR2T3Q8NH03 318 aa24.64■■□□□ 1.54
CPSF1-202ENST00000527827 BAHD1Q8TBE0 780 aaPredicted RBP24.64■■□□□ 1.54
CPSF1-202ENST00000527827 SETD7Q8WTS6 366 aaKnown RBP24.64■■□□□ 1.54
CPSF1-202ENST00000527827 TM7SF3Q9NS93 570 aa24.64■■□□□ 1.54
CPSF1-202ENST00000527827 CER1O95813 267 aa24.63■■□□□ 1.53
CPSF1-202ENST00000527827 C7P10643 843 aa24.63■■□□□ 1.53
CPSF1-202ENST00000527827 MPPE1Q53F39 396 aa24.63■■□□□ 1.53
CPSF1-202ENST00000527827 IL27RAQ6UWB1 636 aa24.63■■□□□ 1.53
CPSF1-202ENST00000527827 DBX2Q6ZNG2 339 aa24.63■■□□□ 1.53
CPSF1-202ENST00000527827 FMNL3Q8IVF7 1028 aa24.63■■□□□ 1.53
CPSF1-202ENST00000527827 EEF2KMTQ96G04 330 aa24.63■■□□□ 1.53
CPSF1-202ENST00000527827 PCED1AQ9H1Q7 454 aa24.63■■□□□ 1.53
CPSF1-202ENST00000527827 TMEM131Q92545 1883 aa24.63■■□□□ 1.53
CPSF1-202ENST00000527827 FASNP49327 2511 aaKnown RBP24.63■■□□□ 1.53
CPSF1-202ENST00000527827 TSPAN3O60637 253 aa24.62■■□□□ 1.53
CPSF1-202ENST00000527827 HLA-FP30511 346 aa24.62■■□□□ 1.53
CPSF1-202ENST00000527827 ARID5AQ03989 594 aa24.62■■□□□ 1.53
CPSF1-202ENST00000527827 PDE4CQ08493 712 aa24.62■■□□□ 1.53
CPSF1-202ENST00000527827 GOLGA7BQ2TAP0 167 aa24.62■■□□□ 1.53
CPSF1-202ENST00000527827 EDRF1Q3B7T1 1238 aa24.62■■□□□ 1.53
CPSF1-202ENST00000527827 SPATA32Q96LK8 384 aa24.62■■□□□ 1.53
CPSF1-202ENST00000527827 TMEM245Q9H330 911 aa24.62■■□□□ 1.53
CPSF1-202ENST00000527827 C6orf106Q9H6K1 298 aaPredicted RBP24.62■■□□□ 1.53
CPSF1-202ENST00000527827 OLA1Q9NTK5 396 aaKnown RBP24.62■■□□□ 1.53
CPSF1-202ENST00000527827 KIAA1522Q9P206 1035 aaPredicted RBP24.62■■□□□ 1.53
CPSF1-202ENST00000527827 STOML2Q9UJZ1 356 aa24.62■■□□□ 1.53
CPSF1-202ENST00000527827 GPSM3Q9Y4H4 160 aa24.62■■□□□ 1.53
CPSF1-202ENST00000527827 LAMA5O15230 3695 aa24.61■■□□□ 1.53
CPSF1-202ENST00000527827 ACACAQ13085 2346 aa24.61■■□□□ 1.53
CPSF1-202ENST00000527827 A0A1B0GVT2 93 aa24.61■■□□□ 1.53
CPSF1-202ENST00000527827 XPO1O14980 1071 aaKnown RBP24.61■■□□□ 1.53
CPSF1-202ENST00000527827 ACSL1P33121 698 aa24.61■■□□□ 1.53
CPSF1-202ENST00000527827 CSNK1EP49674 416 aaKnown RBP24.61■■□□□ 1.53
CPSF1-202ENST00000527827 SLC8A3P57103 927 aa24.61■■□□□ 1.53
CPSF1-202ENST00000527827 KRBA2Q6ZNG9 492 aa24.61■■□□□ 1.53
CPSF1-202ENST00000527827 CYB5D2Q8WUJ1 264 aa24.61■■□□□ 1.53
CPSF1-202ENST00000527827 LHX5Q9H2C1 402 aa24.61■■□□□ 1.53
CPSF1-202ENST00000527827 TOR4AQ9NXH8 423 aa24.61■■□□□ 1.53
CPSF1-202ENST00000527827 SFMBT1Q9UHJ3 866 aa24.61■■□□□ 1.53
CPSF1-202ENST00000527827 TSPAN16Q9UKR8 245 aa24.61■■□□□ 1.53
CPSF1-202ENST00000527827 HBS1LQ9Y450 684 aaKnown RBP24.61■■□□□ 1.53
CPSF1-202ENST00000527827 PCDHGB2Q9Y5G2 931 aa24.61■■□□□ 1.53
CPSF1-202ENST00000527827 APC2O95996 2303 aa24.6■■□□□ 1.53
CPSF1-202ENST00000527827 HARS2P49590 506 aaKnown RBP24.6■■□□□ 1.53
CPSF1-202ENST00000527827 FNDC3BQ53EP0 1204 aaKnown RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms