RNA–Protein interactions for RNA: ENST00000527573.5

CSRP1-210, Transcript of cysteine and glycine rich protein 1, human

TSL 2

Gene CSRP1, Length 567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSRP1-210	ENST00000527573	CD6	P30203	668 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	HLA-F	P30511	346 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	CHKA	P35790	457 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	STX17	P56962	302 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	SLC8A3	P57103	927 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	FKBP3	Q00688	224 aa	Known RBP	13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	ENPEP	Q07075	957 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	TRIP4	Q15650	581 aa	Predicted RBP	13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	CCDC40	Q4G0X9	1142 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	PM20D1	Q6GTS8	502 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	PMF1	Q6P1K2	205 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	LAYN	Q6UX15	382 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	RRAGA	Q7L523	313 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	PIP4P1	Q86T03	277 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	TMPRSS6	Q8IU80	811 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	ARHGAP18	Q8N392	663 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	HDDC3	Q8N4P3	179 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	RNF139	Q8WU17	664 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	SNX19	Q92543	992 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	MYEOV	Q96EZ4	313 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	SIPA1	Q96FS4	1042 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	DNAI2	Q9GZS0	605 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	IL21R	Q9HBE5	538 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	ABCB8	Q9NUT2	735 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	STIM2	Q9P246	746 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	MAN1B1	Q9UKM7	699 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	CTNND2	Q9UQB3	1225 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	ZNF510	Q9Y2H8	683 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	SLC27A6	Q9Y2P4	619 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	PCNX2	A6NKB5	2137 aa		13.54	□□□□□ -0.24
CSRP1-210	ENST00000527573	SPEG	Q15772	3267 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	ARHGAP33	O14559	1287 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	SH3BP5	O60239	455 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	SMC2	O95347	1197 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	CD59	P13987	128 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	FMO5	P49326	533 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	TPMT	P51580	245 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	COPA	P53621	1224 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	DAOA	P59103	153 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	GRIK2	Q13002	908 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	SEMA3B	Q13214	749 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	FNDC3B	Q53EP0	1204 aa	Known RBP	13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	SPDYC	Q5MJ68	293 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	SERPINA13P	Q6UXR4	307 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	CHST9	Q7L1S5	443 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	PPM1K	Q8N3J5	372 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	CHCHD4	Q8N4Q1	142 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	PNPLA1	Q8N8W4	532 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	ADAM32	Q8TC27	787 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	PLD4	Q96BZ4	506 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	ADAM33	Q9BZ11	813 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	MIS12	Q9H081	205 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	SLC32A1	Q9H598	525 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	WSB2	Q9NYS7	404 aa	Predicted RBP	13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	ZMIZ1	Q9ULJ6	1067 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	COQ4	Q9Y3A0	265 aa		13.53	□□□□□ -0.24
CSRP1-210	ENST00000527573	CHD6	Q8TD26	2715 aa		13.52	□□□□□ -0.24
CSRP1-210	ENST00000527573	FAM170A	A1A519	330 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	GFRA2	O00451	464 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	TBL1X	O60907	577 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	GADD45B	O75293	160 aa	Predicted RBP	13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	PROS1	P07225	676 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	VDR	P11473	427 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	BMP6	P22004	513 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	SLC6A4	P31645	630 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	CD70	P32970	193 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	HARS2	P49590	506 aa	Known RBP	13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	MCCD1	P59942	119 aa	Predicted RBP	13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	ARID5A	Q03989	594 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	PKDCC	Q504Y2	493 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	DCAF12L1	Q5VU92	463 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	FAM217A	Q8IXS0	508 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	CPXM2	Q8N436	756 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	ZNF276	Q8N554	614 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	TTC39C	Q8N584	583 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	CEP76	Q8TAP6	659 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	UCMA	Q8WVF2	138 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	NELFB	Q8WX92	580 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	PRCC	Q92733	491 aa	Predicted RBP	13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	CCDC34	Q96HJ3	373 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	NT5C1B	Q96P26	610 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	GSDMA	Q96QA5	445 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	UBXN6	Q9BZV1	441 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	USP36	Q9P275	1121 aa	Known RBP	13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	CKAP5	Q14008	2032 aa		13.52	□□□□□ -0.25
CSRP1-210	ENST00000527573	MUC22	E2RYF6	1773 aa	Predicted RBP	13.51	□□□□□ -0.25
CSRP1-210	ENST00000527573	MOCS2	O96007	188 aa	Predicted RBP	13.51	□□□□□ -0.25
CSRP1-210	ENST00000527573	YWHAE	P62258	255 aa	Known RBP	13.51	□□□□□ -0.25
CSRP1-210	ENST00000527573	BNC1	Q01954	994 aa		13.51	□□□□□ -0.25
CSRP1-210	ENST00000527573	SYCP2L	Q5T4T6	812 aa		13.51	□□□□□ -0.25
CSRP1-210	ENST00000527573	MMS22L	Q6ZRQ5	1243 aa		13.51	□□□□□ -0.25
CSRP1-210	ENST00000527573	SPATA20	Q8TB22	786 aa		13.51	□□□□□ -0.25
CSRP1-210	ENST00000527573	TMA16	Q96EY4	203 aa	Known RBP	13.51	□□□□□ -0.25
CSRP1-210	ENST00000527573	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.51	□□□□□ -0.25
CSRP1-210	ENST00000527573	ACP6	Q9NPH0	428 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms