RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 PDXKO00764 312 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 CALUO43852 315 aaPredicted RBP6.88□□□□□ -1.31
CD44-221ENST00000526000 CER1O95813 267 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 CALCAP01258 141 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 PRR29P0C7W0 189 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 LCP1P13796 627 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 ITPKBP27987 946 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 SGSHP51688 502 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 TKTL1P51854 596 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 YWHAGP61981 247 aaKnown RBP eCLIP6.88□□□□□ -1.31
CD44-221ENST00000526000 CLDN10P78369 228 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 DNM1Q05193 864 aaKnown RBP6.88□□□□□ -1.31
CD44-221ENST00000526000 LRMPQ12912 555 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 SUZ12Q15022 739 aaKnown RBP6.88□□□□□ -1.31
CD44-221ENST00000526000 RESP18Q5W5W9 173 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 CNNM4Q6P4Q7 775 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 RFWD3Q6PCD5 774 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 CLEC17AQ6ZS10 378 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 TMPRSS7Q7RTY8 843 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 ANKS1BQ7Z6G8 1248 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 ADAT2Q7Z6V5 191 aaKnown RBP6.88□□□□□ -1.31
CD44-221ENST00000526000 METTL3Q86U44 580 aaKnown RBP6.88□□□□□ -1.31
CD44-221ENST00000526000 PIGZQ86VD9 579 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 FMNL3Q8IVF7 1028 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 CADM4Q8NFZ8 388 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 OR2T3Q8NH03 318 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 C1orf216Q8TAB5 229 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 GOLGA5Q8TBA6 731 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 SEMA4DQ92854 862 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 BIRC7Q96CA5 298 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 IMPG2Q9BZV3 1241 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 DCLK3Q9C098 648 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 ZDHHC5Q9C0B5 715 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 TM9SF3Q9HD45 589 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 PRSS16Q9NQE7 514 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 ABCB8Q9NUT2 735 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 TOR4AQ9NXH8 423 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 STRIP2Q9ULQ0 834 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 PLA2G4CQ9UP65 541 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 ANKRD6Q9Y2G4 727 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 ZNF510Q9Y2H8 683 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 SLC27A6Q9Y2P4 619 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 ZDHHC9Q9Y397 364 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 PCDHA5Q9Y5H7 936 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 ZFHX4Q86UP3 3567 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 CABIN1Q9Y6J0 2220 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 NUMA1Q14980 2115 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 KNTC1P50748 2209 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 PLK4O00444 970 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 WNT9AO14904 365 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 IKBKBO14920 756 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 MSI1O43347 362 aaKnown RBP6.87□□□□□ -1.31
CD44-221ENST00000526000 ACTN4O43707 911 aaKnown RBP6.87□□□□□ -1.31
CD44-221ENST00000526000 TBL1XO60907 577 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 SEMA4FO95754 770 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 ZBED1O96006 694 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 SLFN14P0C7P3 912 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 KRT13P13646 458 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 JUPP14923 745 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 CD19P15391 556 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 TRIM21P19474 475 aaKnown RBP6.87□□□□□ -1.31
CD44-221ENST00000526000 NR2F2P24468 414 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 HLA-FP30511 346 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 CD70P32970 193 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 RGS7P49802 495 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 RAD23BP54727 409 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 RPS14P62263 151 aaKnown RBP6.87□□□□□ -1.31
CD44-221ENST00000526000 SEMG2Q02383 582 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 PDE4CQ08493 712 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 DNAJC3Q13217 504 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 ADAM9Q13443 819 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 PKP1Q13835 747 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 TEAD4Q15561 434 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 GOLGA7BQ2TAP0 167 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 MPPE1Q53F39 396 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 MBLAC2Q68D91 279 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 KLHDC10Q6PID8 442 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 IL27RAQ6UWB1 636 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 CCDC186Q7Z3E2 898 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 TADA2BQ86TJ2 420 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 SLC9A9Q8IVB4 645 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 DHX40Q8IX18 779 aaKnown RBP6.87□□□□□ -1.31
CD44-221ENST00000526000 ZC3H3Q8IXZ2 948 aaKnown RBP6.87□□□□□ -1.31
CD44-221ENST00000526000 FAM186BQ8IYM0 893 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 SLC4A11Q8NBS3 891 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 CCDC150Q8NCX0 1101 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 PIP4K2CQ8TBX8 421 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 WFDC5Q8TCV5 224 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 RNF139Q8WU17 664 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 TAF4BQ92750 862 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 TMEM176AQ96HP8 235 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 CDC6Q99741 560 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 DUSP9Q99956 384 aaKnown RBP6.87□□□□□ -1.31
CD44-221ENST00000526000 NIF3L1Q9GZT8 377 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 BTBD1Q9H0C5 482 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 CYP3A43Q9HB55 503 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 LRRC4Q9HBW1 653 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 RCOR1Q9UKL0 485 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 RAI2Q9Y5P3 530 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 USP3Q9Y6I4 520 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms