RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 CDK5RAP3Q96JB5 506 aa5.68□□□□□ -1.5
SVIP-202ENST00000525670 TCF25Q9BQ70 676 aa5.68□□□□□ -1.5
SVIP-202ENST00000525670 FDXACB1Q9BRP7 624 aaPredicted RBP5.68□□□□□ -1.5
SVIP-202ENST00000525670 PANK2Q9BZ23 570 aa5.68□□□□□ -1.5
SVIP-202ENST00000525670 BHMT2Q9H2M3 363 aa5.68□□□□□ -1.5
SVIP-202ENST00000525670 ZSWIM4Q9H7M6 989 aa5.68□□□□□ -1.5
SVIP-202ENST00000525670 ATP6V0A4Q9HBG4 840 aa5.68□□□□□ -1.5
SVIP-202ENST00000525670 XPNPEP1Q9NQW7 623 aa5.68□□□□□ -1.5
SVIP-202ENST00000525670 NRBP2Q9NSY0 501 aa5.68□□□□□ -1.5
SVIP-202ENST00000525670 POLR3BQ9NW08 1133 aaPredicted RBP5.68□□□□□ -1.5
SVIP-202ENST00000525670 SUCLA2Q9P2R7 463 aaPredicted RBP5.68□□□□□ -1.5
SVIP-202ENST00000525670 NLRC5Q86WI3 1866 aa5.68□□□□□ -1.5
SVIP-202ENST00000525670 TCHHQ07283 1943 aa5.68□□□□□ -1.5
SVIP-202ENST00000525670 SMIM35A0A1B0GVV1 85 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 DENND3A2RUS2 1198 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 LRRIQ4A6NIV6 560 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 CBX4O00257 560 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 RFPL3O75679 317 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 TOX4O94842 621 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 JUNP05412 331 aaKnown RBP5.67□□□□□ -1.5
SVIP-202ENST00000525670 HARSP12081 509 aaKnown RBP5.67□□□□□ -1.5
SVIP-202ENST00000525670 RARRES1P49788 294 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 SLC26A2P50443 739 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 GPC3P51654 580 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 CAPSQ13938 189 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 BMS1Q14692 1282 aaKnown RBP5.67□□□□□ -1.5
SVIP-202ENST00000525670 MYBPC3Q14896 1274 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 ELAVL1Q15717 326 aaKnown RBP5.67□□□□□ -1.5
SVIP-202ENST00000525670 KRT79Q5XKE5 535 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 TIGD7Q6NT04 549 aaPredicted RBP5.67□□□□□ -1.5
SVIP-202ENST00000525670 Q6ZRM9 215 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 TSHZ1Q6ZSZ6 1077 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 KANSL1Q7Z3B3 1105 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 RPUSD2Q8IZ73 545 aaKnown RBP5.67□□□□□ -1.5
SVIP-202ENST00000525670 DEFB123Q8N688 67 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 PDILTQ8N807 584 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 RDM1Q8NG50 284 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 GDPD5Q8WTR4 605 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 PRPF31Q8WWY3 499 aaKnown RBP5.67□□□□□ -1.5
SVIP-202ENST00000525670 PPM1EQ8WY54 764 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 ARNTL2Q8WYA1 636 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 HERVK_113Q902F9 699 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 LARP4BQ92615 738 aaKnown RBP5.67□□□□□ -1.5
SVIP-202ENST00000525670 TIFAQ96CG3 184 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 MRFAP1L1Q96HT8 127 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 CPB2Q96IY4 423 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 EPSTI1Q96J88 318 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 ELF4Q99607 663 aaPredicted RBP5.67□□□□□ -1.5
SVIP-202ENST00000525670 MMTAG2Q9BU76 263 aaKnown RBP5.67□□□□□ -1.5
SVIP-202ENST00000525670 APOL6Q9BWW8 343 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 MTIF3Q9H2K0 278 aaKnown RBP5.67□□□□□ -1.5
SVIP-202ENST00000525670 TMX1Q9H3N1 280 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 ZHX3Q9H4I2 956 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 MINDY3Q9H8M7 445 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 PADI3Q9ULW8 664 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 ST3GAL5Q9UNP4 418 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 PIN4Q9Y237 131 aaKnown RBP5.67□□□□□ -1.5
SVIP-202ENST00000525670 REXO2Q9Y3B8 237 aaKnown RBP5.67□□□□□ -1.5
SVIP-202ENST00000525670 SPO11Q9Y5K1 396 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 COL4A3BPQ9Y5P4 624 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 TRANK1O15050 2925 aa5.67□□□□□ -1.5
SVIP-202ENST00000525670 COL4A6Q14031 1691 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 UNC80Q8N2C7 3258 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 A0A087X1B8 175 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 EPOPA6NHQ4 379 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 INO80B-WBP1J3KQ70 363 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 PPP1R12AO14974 1030 aaPredicted RBP5.66□□□□□ -1.5
SVIP-202ENST00000525670 B4GALT5O43286 388 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 GPR32O75388 356 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 CXCL10P02778 98 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 KRT18P05783 430 aaKnown RBP5.66□□□□□ -1.5
SVIP-202ENST00000525670 JMJD7P0C870 316 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 SLC9A1P19634 815 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 TMOD1P28289 359 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 RFC2P35250 354 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 ANP32AP39687 249 aaKnown RBP5.66□□□□□ -1.5
SVIP-202ENST00000525670 PBX3P40426 434 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 MAN2A2P49641 1150 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 SMAD3P84022 425 aaKnown RBP5.66□□□□□ -1.5
SVIP-202ENST00000525670 ADCY2Q08462 1091 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 LAMTOR4Q0VGL1 99 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 PTPAQ15257 358 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 SMN1Q16637 294 aaKnown RBP5.66□□□□□ -1.5
SVIP-202ENST00000525670 PLEKHG4Q58EX7 1191 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 FKBP15Q5T1M5 1219 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 TWF2Q6IBS0 349 aaKnown RBP5.66□□□□□ -1.5
SVIP-202ENST00000525670 OTUD6AQ7L8S5 288 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 CATSPER4Q7RTX7 472 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 GPBP1Q86WP2 473 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 PHYKPLQ8IUZ5 450 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 HERC6Q8IVU3 1022 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 C4orf19Q8IY42 314 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 LINC01465Q8N7H1 131 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 RNF149Q8NC42 400 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 NEK9Q8TD19 979 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 PSPC1Q8WXF1 523 aaKnown RBP5.66□□□□□ -1.5
SVIP-202ENST00000525670 STAMQ92783 540 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 CLIP3Q96DZ5 547 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 YME1L1Q96TA2 773 aa5.66□□□□□ -1.5
SVIP-202ENST00000525670 ADAM2Q99965 735 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms