RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 CDK16Q00536 496 aa23.25■■□□□ 1.31
NKX6-3-202ENST00000524115 EFTUD2Q15029 972 aaKnown RBP eCLIP23.25■■□□□ 1.31
NKX6-3-202ENST00000524115 FBXO47Q5MNV8 452 aa23.25■■□□□ 1.31
NKX6-3-202ENST00000524115 RASIP1Q5U651 963 aa23.25■■□□□ 1.31
NKX6-3-202ENST00000524115 CYS1Q717R9 158 aa23.25■■□□□ 1.31
NKX6-3-202ENST00000524115 LRRC6Q86X45 466 aa23.25■■□□□ 1.31
NKX6-3-202ENST00000524115 VWCEQ96DN2 955 aa23.25■■□□□ 1.31
NKX6-3-202ENST00000524115 TNIP3Q96KP6 325 aa23.25■■□□□ 1.31
NKX6-3-202ENST00000524115 C11orf84Q9BUA3 381 aaPredicted RBP23.25■■□□□ 1.31
NKX6-3-202ENST00000524115 TRIM55Q9BYV6 548 aa23.25■■□□□ 1.31
NKX6-3-202ENST00000524115 IQCGQ9H095 443 aaKnown RBP23.25■■□□□ 1.31
NKX6-3-202ENST00000524115 LRMDAQ9H2I8 198 aa23.25■■□□□ 1.31
NKX6-3-202ENST00000524115 ZC3H7BQ9UGR2 993 aaKnown RBP23.25■■□□□ 1.31
NKX6-3-202ENST00000524115 RPL26L1Q9UNX3 145 aaKnown RBP23.25■■□□□ 1.31
NKX6-3-202ENST00000524115 HEY1Q9Y5J3 304 aa23.25■■□□□ 1.31
NKX6-3-202ENST00000524115 PITPNM1O00562 1244 aa23.24■■□□□ 1.31
NKX6-3-202ENST00000524115 KLF11O14901 512 aa23.24■■□□□ 1.31
NKX6-3-202ENST00000524115 GPR32O75388 356 aa23.24■■□□□ 1.31
NKX6-3-202ENST00000524115 GRAP2O75791 330 aa23.24■■□□□ 1.31
NKX6-3-202ENST00000524115 DARSP14868 501 aaKnown RBP23.24■■□□□ 1.31
NKX6-3-202ENST00000524115 NEK3P51956 506 aa23.24■■□□□ 1.31
NKX6-3-202ENST00000524115 HDAC4P56524 1084 aa23.24■■□□□ 1.31
NKX6-3-202ENST00000524115 SLC8A3P57103 927 aa23.24■■□□□ 1.31
NKX6-3-202ENST00000524115 BFSP2Q13515 415 aa23.24■■□□□ 1.31
NKX6-3-202ENST00000524115 KBTBD12Q3ZCT8 623 aa23.24■■□□□ 1.31
NKX6-3-202ENST00000524115 SV2CQ496J9 727 aa23.24■■□□□ 1.31
NKX6-3-202ENST00000524115 OTOAQ7RTW8 1153 aa23.24■■□□□ 1.31
NKX6-3-202ENST00000524115 MYLK2Q9H1R3 596 aa23.24■■□□□ 1.31
NKX6-3-202ENST00000524115 GRID1Q9ULK0 1009 aa23.24■■□□□ 1.31
NKX6-3-202ENST00000524115 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 PIRO00625 290 aa23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 KRT38O76015 456 aa23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 KCNE1P15382 129 aa23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 ADRA1DP25100 572 aa23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 CNTFP26441 200 aa23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 L1CAMP32004 1257 aa23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 GNL1P36915 607 aaPredicted RBP23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 FDFT1P37268 417 aa23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 KIZQ2M2Z5 673 aa23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 SCUBE3Q8IX30 993 aa23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 HERVK_113Q902F9 699 aa23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 QKIQ96PU8 341 aaKnown RBP eCLIP23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 MTMR10Q9NXD2 777 aa23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 GGT7Q9UJ14 662 aa23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.23■■□□□ 1.31
NKX6-3-202ENST00000524115 MBLAC1A4D2B0 266 aaPredicted RBP23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 STK10O94804 968 aaKnown RBP23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 MLNP12872 115 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 KCNJ2P63252 427 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 SOWAHAQ2M3V2 549 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 OTOP2Q7RTS6 562 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 FAM228AQ86W67 206 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 CCNJLQ8IV13 435 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 ERP27Q96DN0 273 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 PIWIL1Q96J94 861 aaKnown RBP23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 ZMAT2Q96NC0 199 aaKnown RBP23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 ETNK1Q9HBU6 452 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 POPDC2Q9HBU9 364 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 FAM49BQ9NUQ9 324 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 CHKBQ9Y259 395 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 MTO1Q9Y2Z2 717 aaKnown RBP23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 PIK3R2O00459 728 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 ARL4AP40617 200 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 TAF6P49848 677 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 DBN1Q16643 649 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 XKR4Q5GH76 650 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 IGDCC3Q8IVU1 814 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 RAB3IL1Q8TBN0 382 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 SLCO1B3Q9NPD5 702 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 SETD4Q9NVD3 440 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 CXXC1Q9P0U4 656 aaPredicted RBP23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 TUBGCP4Q9UGJ1 667 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 AP4E1Q9UPM8 1137 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 TTLL3Q9Y4R7 772 aa23.22■■□□□ 1.31
NKX6-3-202ENST00000524115 KPNA7A9QM74 516 aa23.21■■□□□ 1.31
NKX6-3-202ENST00000524115 TRAFD1O14545 582 aaPredicted RBP23.21■■□□□ 1.31
NKX6-3-202ENST00000524115 COPEO14579 308 aa23.21■■□□□ 1.31
NKX6-3-202ENST00000524115 APOEP02649 317 aa23.21■■□□□ 1.31
NKX6-3-202ENST00000524115 MAGEA3P43357 314 aa23.21■■□□□ 1.31
NKX6-3-202ENST00000524115 HIC1Q14526 733 aa23.21■■□□□ 1.31
NKX6-3-202ENST00000524115 LIMS2Q7Z4I7 341 aa23.21■■□□□ 1.31
NKX6-3-202ENST00000524115 DEFB128Q7Z7B8 93 aa23.21■■□□□ 1.31
NKX6-3-202ENST00000524115 TAB3Q8N5C8 712 aaPredicted RBP23.21■■□□□ 1.31
NKX6-3-202ENST00000524115 APPL2Q8NEU8 664 aa23.21■■□□□ 1.31
NKX6-3-202ENST00000524115 TSSK1BQ9BXA7 367 aa23.21■■□□□ 1.31
NKX6-3-202ENST00000524115 DHX35Q9H5Z1 703 aaKnown RBP23.21■■□□□ 1.31
NKX6-3-202ENST00000524115 GPATCH2LQ9NWQ4 482 aa23.21■■□□□ 1.31
NKX6-3-202ENST00000524115 SF3B1O75533 1304 aaKnown RBP eCLIP23.2■■□□□ 1.31
NKX6-3-202ENST00000524115 XPO1O14980 1071 aaKnown RBP23.2■■□□□ 1.3
NKX6-3-202ENST00000524115 RECQL4O94761 1208 aa23.2■■□□□ 1.3
NKX6-3-202ENST00000524115 SMIM10L2AP0DMW4 78 aa23.2■■□□□ 1.3
NKX6-3-202ENST00000524115 SMIM10L2BP0DMW5 78 aa23.2■■□□□ 1.3
NKX6-3-202ENST00000524115 RFC2P35250 354 aa23.2■■□□□ 1.3
NKX6-3-202ENST00000524115 ETV4P43268 484 aa23.2■■□□□ 1.3
NKX6-3-202ENST00000524115 CDK18Q07002 472 aa23.2■■□□□ 1.3
NKX6-3-202ENST00000524115 NAB1Q13506 487 aa23.2■■□□□ 1.3
NKX6-3-202ENST00000524115 SEMA5AQ13591 1074 aa23.2■■□□□ 1.3
NKX6-3-202ENST00000524115 PPP6R3Q5H9R7 873 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms