RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 SMURF2Q9HAU4 748 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 A1CFQ9NQ94 594 aaKnown RBP3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 STK32BQ9NY57 414 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 CPNE7Q9UBL6 633 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 TPCN1Q9ULQ1 816 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 COL14A1Q05707 1796 aaKnown RBP3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 COL22A1Q8NFW1 1626 aaPredicted RBP3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 MEGF6O75095 1541 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 KDM6AO15550 1401 aaPredicted RBP3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 MYH7P12883 1935 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 MYO1FO00160 1098 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 AP4M1O00189 453 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 TSPAN6O43657 245 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 EXOC3O60645 756 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 FRAT2O75474 233 aaPredicted RBP3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 RASSF9O75901 435 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 REC8O95072 547 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 DDX58O95786 925 aaKnown RBP3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 LATS1O95835 1130 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 DLDP09622 509 aaKnown RBP3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 ZKSCAN1P17029 563 aaPredicted RBP3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 EIF2S2P20042 333 aaKnown RBP3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 MPGP29372 298 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 SSR1P43307 286 aaKnown RBP3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 ITGA8P53708 1063 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 E2F1Q01094 437 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 MAP2K1Q02750 393 aaPredicted RBP3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 RABEP1Q15276 862 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 PROSER3Q2NL68 480 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 PTCHD3Q3KNS1 767 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 MTX3Q5HYI7 312 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 CACHD1Q5VU97 1274 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 SLC9A4Q6AI14 798 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 NXNQ6DKJ4 435 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 C11orf87Q6NUJ2 197 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 KSR2Q6VAB6 950 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 ZNF66Q6ZN08 573 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 VGLL2Q8N8G2 317 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 PNLDC1Q8NA58 520 aaKnown RBP3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 OR56A3Q8NH54 315 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 CYP2W1Q8TAV3 490 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 DNAJB14Q8TBM8 379 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 MAML1Q92585 1016 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 SPSB4Q96A44 273 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 PPP1R9BQ96SB3 815 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 MYCBPQ99417 103 aaPredicted RBP3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 C17orf80Q9BSJ5 609 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 USP44Q9H0E7 712 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 DDX21Q9NR30 783 aaKnown RBP eCLIP3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 HYPKQ9NX55 129 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 CHMP5Q9NZZ3 219 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 CHPF2Q9P2E5 772 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 DDX20Q9UHI6 824 aaKnown RBP3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 L1RE1Q9UN81 338 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 LRRFIP2Q9Y608 721 aaKnown RBP3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 TJP1Q07157 1748 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 TOGARAM1Q9Y4F4 1720 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 LRP6O75581 1613 aa3.8□□□□□ -1.8
LINCR-0001-203ENST00000524047 COL5A2P05997 1499 aaPredicted RBP3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 SPEF2Q9C093 1822 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 ADCY9O60503 1353 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 UTYO14607 1347 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 PNMA6EA0A0J9YXQ4 647 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 PI4KAP2A4QPH2 592 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 A6NNZ2 444 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 VSTM5A8MXK1 200 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 TISP43B9A030 160 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 PSMD9O00233 223 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 RGS10O43665 173 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 SRGAP2O75044 1071 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 MAP4K4O95819 1239 aaPredicted RBP3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 PRKCBP05771 671 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 CYP2D6P10635 497 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 PHKG2P15735 406 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 MX1P20591 662 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 FPR3P25089 353 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 PRKAR1BP31321 381 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 CACNB3P54284 484 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 HOXA4Q00056 320 aaPredicted RBP3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 GABPB1Q06547 395 aaPredicted RBP3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 MTX1Q13505 466 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 ZKSCAN8Q15776 578 aaPredicted RBP3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 KIAA0753Q2KHM9 967 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 TBC1D25Q3MII6 688 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 C3orf38Q5JPI3 329 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 CERCAMQ5T4B2 595 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 BEND3Q5T5X7 828 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 ZNF790Q6PG37 636 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 KIRREL2Q6UWL6 708 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 ZDHHC24Q6UX98 284 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 TRIM72Q6ZMU5 477 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 ZSCAN30Q86W11 494 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 ERC1Q8IUD2 1116 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 CREBRFQ8IUR6 639 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 C16orf71Q8IYS4 520 aaPredicted RBP3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 ANKRD13AQ8IZ07 590 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 MYO1HQ8N1T3 1032 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 OTUD6BQ8N6M0 293 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 PI4KAP1Q8N8J0 262 aa3.79□□□□□ -1.8
LINCR-0001-203ENST00000524047 KIF1BPQ96EK5 621 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms