RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 KCNA5P22460 613 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 TBXAS1P24557 533 aaPredicted RBP8.12□□□□□ -1.11
SPIDR-223ENST00000524033 CD52P31358 61 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 BMPR1AP36894 532 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 CDKN2BP42772 138 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 ETV4P43268 484 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 RASSF2P50749 326 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 ARSEP51690 589 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 OCRLQ01968 901 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 SLC18A2Q05940 514 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 TMEM62Q0P6H9 643 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 KRT72Q14CN4 511 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 EFTUD2Q15029 972 aaKnown RBP eCLIP8.12□□□□□ -1.11
SPIDR-223ENST00000524033 WDR72Q3MJ13 1102 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 HHATQ5VTY9 493 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 FAM160B1Q5W0V3 765 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 IRGCQ6NXR0 463 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 LVRNQ6Q4G3 990 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 MTHFD1LQ6UB35 978 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 C4orf50Q6ZRC1 276 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 CENPUQ71F23 418 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 CLNKQ7Z7G1 428 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 C4orf33Q8N1A6 199 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 ATP11CQ8NB49 1132 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 RBBP8NLQ8NC74 664 aaPredicted RBP8.12□□□□□ -1.11
SPIDR-223ENST00000524033 RFWD2Q8NHY2 731 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 TRAPPC12Q8WVT3 735 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 CPT1BQ92523 772 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 SPDL1Q96EA4 605 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 FAM84AQ96KN4 292 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 NUDCD1Q96RS6 583 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 FTHL17Q9BXU8 183 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 CADM1Q9BY67 442 aaKnown RBP8.12□□□□□ -1.11
SPIDR-223ENST00000524033 HAPLN2Q9GZV7 340 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 VPS11Q9H270 941 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 MMADHCQ9H3L0 296 aaPredicted RBP8.12□□□□□ -1.11
SPIDR-223ENST00000524033 DCLRE1BQ9H816 532 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 UBE2ZQ9H832 354 aaPredicted RBP8.12□□□□□ -1.11
SPIDR-223ENST00000524033 AGO3Q9H9G7 860 aaKnown RBP8.12□□□□□ -1.11
SPIDR-223ENST00000524033 POLMQ9NP87 494 aaPredicted RBP8.12□□□□□ -1.11
SPIDR-223ENST00000524033 ARL8BQ9NVJ2 186 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 DDX56Q9NY93 547 aaKnown RBP8.12□□□□□ -1.11
SPIDR-223ENST00000524033 ANKFY1Q9P2R3 1169 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 ZFP69BQ9UJL9 534 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 PADI3Q9ULW8 664 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 SQORQ9Y6N5 450 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 TRIOO75962 3097 aa8.12□□□□□ -1.11
SPIDR-223ENST00000524033 SMIM35A0A1B0GVV1 85 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 DPPA5A6NC42 116 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 POC1B-GALNT4F8VUJ3 575 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 PI4K2BG5E9Z4 385 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 H0YCG3 227 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 HBP1O60381 514 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 SKAP2O75563 359 aaPredicted RBP8.11□□□□□ -1.11
SPIDR-223ENST00000524033 HAUS5O94927 633 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 TJP3O95049 919 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 C1QAP02745 245 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 CALB1P05937 261 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 RB1P06400 928 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 TROVE2P10155 538 aaKnown RBP eCLIP8.11□□□□□ -1.11
SPIDR-223ENST00000524033 BMP2P12643 396 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 KRT10P13645 584 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 CA4P22748 312 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 SP100P23497 879 aaPredicted RBP8.11□□□□□ -1.11
SPIDR-223ENST00000524033 ADRA1DP25100 572 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 CDC25CP30307 473 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 GNA15P30679 374 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 CTNNB1P35222 781 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 VHLP40337 213 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 CCNFP41002 786 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 CETN2P41208 172 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 PIK3CAP42336 1068 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 PTDSS1P48651 473 aaKnown RBP8.11□□□□□ -1.11
SPIDR-223ENST00000524033 TUBP50607 506 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 GEMIN4P57678 1058 aaKnown RBP8.11□□□□□ -1.11
SPIDR-223ENST00000524033 CDK16Q00536 496 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 CDK18Q07002 472 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 PDIA2Q13087 525 aaKnown RBP8.11□□□□□ -1.11
SPIDR-223ENST00000524033 GPS1Q13098 491 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 BTG3Q14201 252 aaPredicted RBP8.11□□□□□ -1.11
SPIDR-223ENST00000524033 KLHL38Q2WGJ6 581 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 ATP13A4Q4VNC1 1196 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 TAF1BQ53T94 588 aaPredicted RBP8.11□□□□□ -1.11
SPIDR-223ENST00000524033 C2CD6Q53TS8 623 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 TFDP3Q5H9I0 405 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 WDR44Q5JSH3 913 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 ZNF484Q5JVG2 852 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 ANKRD22Q5VYY1 191 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 NAIF1Q69YI7 327 aaPredicted RBP8.11□□□□□ -1.11
SPIDR-223ENST00000524033 TXNRD3NBQ6F5E7 133 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 SPOPLQ6IQ16 392 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 RFWD3Q6PCD5 774 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 EP400NLQ6ZTU2 488 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 Q6ZVU0 165 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 BBS12Q6ZW61 710 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 POLNQ7Z5Q5 900 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 PCGF5Q86SE9 256 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 PHLDB2Q86SQ0 1253 aa8.11□□□□□ -1.11
SPIDR-223ENST00000524033 RTN4RL1Q86UN2 441 aaPredicted RBP8.11□□□□□ -1.11
SPIDR-223ENST00000524033 LMNTD2Q8IXW0 634 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms