RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	KCNJ11	Q14654	390 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	FASTKD3	Q14CZ7	662 aa	Known RBP	11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	TIGD5	Q53EQ6	642 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	LGSN	Q5TDP6	509 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	FAXC	Q5TGI0	409 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	HHAT	Q5VTY9	493 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	LHX8	Q68G74	356 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	FOXR1	Q6PIV2	292 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	DCLRE1A	Q6PJP8	1040 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	KCNT2	Q6UVM3	1135 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	EXOC3L1	Q86VI1	746 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	DCP1B	Q8IZD4	617 aa	Known RBP	11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	CCNY	Q8ND76	341 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	GDAP1	Q8TB36	358 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	CCDC110	Q8TBZ0	833 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	RTP4	Q96DX8	246 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	SLC9A7	Q96T83	725 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	NPY6R	Q99463	290 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	ACBD6	Q9BR61	282 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	FTHL17	Q9BXU8	183 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	IQCG	Q9H095	443 aa	Known RBP	11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	ACSS3	Q9H6R3	686 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	LRRC4C	Q9HCJ2	640 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.13	□□□□□ -0.63	7e-6	■■■■□ 20.5
SPIDR-222	ENST00000524006	KANSL3	Q9P2N6	904 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	GGA2	Q9UJY4	613 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	LRFN2	Q9ULH4	789 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	PCDHB8	Q9UN66	801 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	FAM169A	Q9Y6X4	670 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	MICAL3	Q7RTP6	2002 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	NUP205	Q92621	2012 aa		11.13	□□□□□ -0.63
SPIDR-222	ENST00000524006	PRUNE2	Q8WUY3	3088 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006		A0A0A0MRY4	1105 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	MYBPHL	A2RUH7	354 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006		E7ESA3	106 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006		H0YHG0	523 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	RNF103	O00237	685 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	MTSS1	O43312	755 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	MFSD11	O43934	449 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	MGEA5	O60502	916 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	OPHN1	O60890	802 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	BANF1	O75531	89 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	GABBR2	O75899	941 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	MAP3K6	O95382	1288 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	EOMES	O95936	686 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	CYP11A1	P05108	521 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	USP17L7	P0C7H9	530 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	TPSB2	P20231	275 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	CA4	P22748	312 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	ELK3	P41970	407 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	BRCC3	P46736	316 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	ATXN1	P54253	815 aa	Known RBP	11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	COG7	P83436	770 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	GBE1	Q04446	702 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	YWHAH	Q04917	246 aa	Predicted RBP	11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	BFSP2	Q13515	415 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	TPSAB1	Q15661	275 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	NOMO2	Q5JPE7	1267 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	FNBP1L	Q5T0N5	605 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	NCBP2-AS2	Q69YL0	99 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	CASC4	Q6P4E1	433 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	C3orf62	Q6ZUJ4	267 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	RFX8	Q6ZV50	586 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	CTAGE3P	Q8IX95	158 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	FBF1	Q8TES7	1133 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	HTR3C	Q8WXA8	447 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	RSPH1	Q8WYR4	309 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.12	□□□□□ -0.63	7e-14	■■■■□ 21.1
SPIDR-222	ENST00000524006	NTAN1	Q96AB6	310 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	LRRC39	Q96DD0	335 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	SUSD3	Q96L08	255 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	SPATA13	Q96N96	652 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	PAFAH2	Q99487	392 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	SMO	Q99835	787 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	PLCD4	Q9BRC7	762 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	ARHGEF4	Q9NR80	690 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	KLHL8	Q9P2G9	620 aa	Predicted RBP	11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	ZC3H7B	Q9UGR2	993 aa	Known RBP	11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	MAD1L1	Q9Y6D9	718 aa		11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	11.12	□□□□□ -0.63
SPIDR-222	ENST00000524006	GREB1	Q4ZG55	1949 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	SCN5A	Q14524	2016 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	DOCK4	Q8N1I0	1966 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006		C9IYK1	514 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	DLL1	O00548	723 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	NCAM2	O15394	837 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	GCAT	O75600	419 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	NEBL	O76041	1014 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	BEST1	O76090	585 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	ZWINT	O95229	277 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	NEFH	P12036	1026 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	CKB	P12277	381 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	MX2	P20592	715 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	BDNF	P23560	247 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	SSTR1	P30872	391 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	CYP2C18	P33260	490 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	GRIK1	P39086	918 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	OR1G1	P47890	313 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms