RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 TFF2Q03403 129 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 ICA1Q05084 483 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 CCDC15Q0P6D6 951 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 PTK2BQ14289 1009 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 SPARCL1Q14515 664 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 KRT72Q14CN4 511 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 PUM3Q15397 648 aaKnown RBP6.83□□□□□ -1.32
CPNE3-206ENST00000523469 TRIM71Q2Q1W2 868 aaKnown RBP6.83□□□□□ -1.32
CPNE3-206ENST00000523469 GGT6Q6P531 493 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 GATAD2AQ86YP4 633 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 SEMA6DQ8NFY4 1073 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 CCDC17Q96LX7 622 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 PRPF18Q99633 342 aaKnown RBP6.83□□□□□ -1.32
CPNE3-206ENST00000523469 USP29Q9HBJ7 922 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 OBP2BQ9NPH6 170 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 VPS45Q9NRW7 570 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 FNDC1Q4ZHG4 1894 aaPredicted RBP6.83□□□□□ -1.32
CPNE3-206ENST00000523469 DEPDC5O75140 1603 aa6.83□□□□□ -1.32
CPNE3-206ENST00000523469 LINC01548A6NM66 108 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 H3BNC9 293 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 J3KTA2 159 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 PCDH17O14917 1159 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 NPC1O15118 1278 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 CHRM5P08912 532 aaPredicted RBP6.82□□□□□ -1.32
CPNE3-206ENST00000523469 TMIGD3P0DMS9 266 aaPredicted RBP6.82□□□□□ -1.32
CPNE3-206ENST00000523469 MMP8P22894 467 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 GSTM5P46439 218 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 CSHL1Q14406 222 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 FAM187BQ17R55 369 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 ZACNQ401N2 412 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 PRAMEF17Q5VTA0 474 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 ZNF772Q68DY9 489 aaPredicted RBP6.82□□□□□ -1.32
CPNE3-206ENST00000523469 AFAP1Q8N556 730 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 MAFAQ8NHW3 353 aaPredicted RBP6.82□□□□□ -1.32
CPNE3-206ENST00000523469 FAM71BQ8TC56 605 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 HS6ST2Q96MM7 605 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 SAP30LQ9HAJ7 183 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 PTGFRNQ9P2B2 879 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 FZD4Q9ULV1 537 aa6.82□□□□□ -1.32
CPNE3-206ENST00000523469 NPHP4O75161 1426 aaPredicted RBP6.82□□□□□ -1.32
CPNE3-206ENST00000523469 MLH3Q9UHC1 1453 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 PNMA6EA0A0J9YXQ4 647 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 AQP12BA6NM10 295 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 PRKCGP05129 697 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 ANXA6P08133 673 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 NHLRC4P0CG21 123 aaPredicted RBP6.81□□□□□ -1.32
CPNE3-206ENST00000523469 CD38P28907 300 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 PDIA3P30101 505 aaKnown RBP6.81□□□□□ -1.32
CPNE3-206ENST00000523469 ALDH18A1P54886 795 aaKnown RBP6.81□□□□□ -1.32
CPNE3-206ENST00000523469 TUBA4AP68366 448 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 SEMA3BQ13214 749 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 BFSP2Q13515 415 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 LARS2Q15031 903 aaKnown RBP6.81□□□□□ -1.32
CPNE3-206ENST00000523469 PFKFB4Q16877 469 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 P3H1Q32P28 736 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 CERKLQ49MI3 558 aaPredicted RBP6.81□□□□□ -1.32
CPNE3-206ENST00000523469 C10orf62Q5T681 223 aaPredicted RBP6.81□□□□□ -1.32
CPNE3-206ENST00000523469 CCDC144NLQ6NUI1 221 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 TMEM65Q6PI78 240 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 DCDC5Q6ZRR9 648 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 PIK3AP1Q6ZUJ8 805 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 CHSY1Q86X52 802 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 PNLDC1Q8NA58 520 aaKnown RBP6.81□□□□□ -1.32
CPNE3-206ENST00000523469 ZNF764Q96H86 408 aaPredicted RBP6.81□□□□□ -1.32
CPNE3-206ENST00000523469 PRR11Q96HE9 360 aaPredicted RBP6.81□□□□□ -1.32
CPNE3-206ENST00000523469 RITA1Q96K30 269 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 ASB2Q96Q27 587 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 EIF3CQ99613 913 aaKnown RBP6.81□□□□□ -1.32
CPNE3-206ENST00000523469 EPS8L2Q9H6S3 715 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 FSCN3Q9NQT6 498 aa6.81□□□□□ -1.32
CPNE3-206ENST00000523469 KIF14Q15058 1648 aa6.8□□□□□ -1.32
CPNE3-206ENST00000523469 MANSC4A6NHS7 340 aaPredicted RBP6.8□□□□□ -1.32
CPNE3-206ENST00000523469 LGALS16A8MUM7 142 aa6.8□□□□□ -1.32
CPNE3-206ENST00000523469 TISP43B9A030 160 aa6.8□□□□□ -1.32
CPNE3-206ENST00000523469 SYT5O00445 386 aa6.8□□□□□ -1.32
CPNE3-206ENST00000523469 ASNA1O43681 348 aa6.8□□□□□ -1.32
CPNE3-206ENST00000523469 PRAMEF2O60811 474 aa6.8□□□□□ -1.32
CPNE3-206ENST00000523469 TAF5LO75529 589 aa6.8□□□□□ -1.32
CPNE3-206ENST00000523469 ITGA5P08648 1049 aa6.8□□□□□ -1.32
CPNE3-206ENST00000523469 SLC10A2Q12908 348 aaPredicted RBP6.8□□□□□ -1.32
CPNE3-206ENST00000523469 TMEM119Q4V9L6 283 aa6.8□□□□□ -1.32
CPNE3-206ENST00000523469 NRSN1Q8IZ57 195 aa6.8□□□□□ -1.32
CPNE3-206ENST00000523469 STYXQ8WUJ0 223 aa6.8□□□□□ -1.32
CPNE3-206ENST00000523469 WDR60Q8WVS4 1066 aa6.8□□□□□ -1.32
CPNE3-206ENST00000523469 KAZALD1Q96I82 304 aa6.8□□□□□ -1.32
CPNE3-206ENST00000523469 ABCC1P33527 1531 aa6.8□□□□□ -1.32
CPNE3-206ENST00000523469 CDK12Q9NYV4 1490 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-206ENST00000523469 PRRT4C9JH25 899 aa6.79□□□□□ -1.32
CPNE3-206ENST00000523469 CLIC1O00299 241 aa6.79□□□□□ -1.32
CPNE3-206ENST00000523469 CTIFO43310 598 aaKnown RBP6.79□□□□□ -1.32
CPNE3-206ENST00000523469 RBMXL2O75526 392 aaKnown RBP6.79□□□□□ -1.32
CPNE3-206ENST00000523469 USP1O94782 785 aa6.79□□□□□ -1.32
CPNE3-206ENST00000523469 GALNSP34059 522 aa6.79□□□□□ -1.32
CPNE3-206ENST00000523469 GALNT1Q10472 559 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-206ENST00000523469 BLMHQ13867 455 aa6.79□□□□□ -1.32
CPNE3-206ENST00000523469 KCNB1Q14721 858 aa6.79□□□□□ -1.32
CPNE3-206ENST00000523469 MFSD13AQ14CX5 517 aa6.79□□□□□ -1.32
CPNE3-206ENST00000523469 MSANTD2Q6P1R3 559 aa6.79□□□□□ -1.32
CPNE3-206ENST00000523469 SYCE2Q6PIF2 218 aa6.79□□□□□ -1.32
CPNE3-206ENST00000523469 VSTM1Q6UX27 236 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms