RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 SYCP2LQ5T4T6 812 aa13.21□□□□□ -0.29
TOP1MT-217ENST00000523417 TMEM215Q68D42 235 aa13.21□□□□□ -0.29
TOP1MT-217ENST00000523417 MSANTD2Q6P1R3 559 aa13.21□□□□□ -0.29
TOP1MT-217ENST00000523417 FMNL3Q8IVF7 1028 aa13.21□□□□□ -0.29
TOP1MT-217ENST00000523417 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.21□□□□□ -0.29
TOP1MT-217ENST00000523417 DDI1Q8WTU0 396 aa13.21□□□□□ -0.29
TOP1MT-217ENST00000523417 TFAP2BQ92481 460 aa13.21□□□□□ -0.29
TOP1MT-217ENST00000523417 TMA16Q96EY4 203 aaKnown RBP13.21□□□□□ -0.29
TOP1MT-217ENST00000523417 IPO9Q96P70 1041 aaKnown RBP13.21□□□□□ -0.29
TOP1MT-217ENST00000523417 MKRN2Q9H000 416 aaKnown RBP13.21□□□□□ -0.29
TOP1MT-217ENST00000523417 PCED1AQ9H1Q7 454 aa13.21□□□□□ -0.29
TOP1MT-217ENST00000523417 CYP8B1Q9UNU6 501 aa13.21□□□□□ -0.29
TOP1MT-217ENST00000523417 CNTN6Q9UQ52 1028 aa13.21□□□□□ -0.29
TOP1MT-217ENST00000523417 RAD54BQ9Y620 910 aa13.21□□□□□ -0.29
TOP1MT-217ENST00000523417 PCNX2A6NKB5 2137 aa13.21□□□□□ -0.3
TOP1MT-217ENST00000523417 FAM221BA6H8Z2 402 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 TRIM49BA6NDI0 452 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 NDUFS2O75306 463 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 GJB3O75712 270 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 IGLV3-27P01718 113 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 HMBSP08397 361 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 HOXD9P28356 352 aaPredicted RBP13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 MARSP56192 900 aaKnown RBP13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 DAOAP59103 153 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 GCNT1Q02742 428 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 RING1Q06587 406 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 ZNF252P-AS1Q0IIN9 211 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 CETN1Q12798 172 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 CAMK2GQ13555 558 aaPredicted RBP13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 ZNF234Q14588 700 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 UAP1L1Q3KQV9 507 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 TTI2Q6NXR4 508 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 PMF1Q6P1K2 205 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 BEND5Q7L4P6 421 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 TMPRSS6Q8IU80 811 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 DEFB119Q8N690 84 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 KDF1Q8NAX2 398 aaPredicted RBP13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 EHBP1Q8NDI1 1231 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 UBA3Q8TBC4 463 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 WFIKKN2Q8TEU8 576 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 RNF139Q8WU17 664 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 NDRG1Q92597 394 aaKnown RBP13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 BHMTQ93088 406 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 HSPA12BQ96MM6 686 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 ZSWIM1Q9BR11 485 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 ZDHHC5Q9C0B5 715 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 TMEM245Q9H330 911 aa13.2□□□□□ -0.3
TOP1MT-217ENST00000523417 MAP1BP46821 2468 aaKnown RBP13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 METTL12A8MUP2 240 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 PPP1R3GB7ZBB8 358 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 RNF225M0QZC1 329 aaPredicted RBP13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 IRAK2O43187 625 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 SYNCRIPO60506 623 aaKnown RBP13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 OPHN1O60890 802 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 FBXO21O94952 628 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 GNA14O95837 355 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 CFIP05156 583 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 CD59P13987 128 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 CD19P15391 556 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 GNSP15586 552 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 CD44P16070 742 aaKnown RBP13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 TPMTP51580 245 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 COPAP53621 1224 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 ADIGQ0VDE8 80 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 BECN1Q14457 450 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 MEA1Q16626 185 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 TMEM270Q6UE05 265 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 ADIPOR2Q86V24 386 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 UNC45BQ8IWX7 931 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 SIX6OS1Q8N1H7 587 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 ZNF557Q8N988 423 aaPredicted RBP13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 DEFB124Q8NES8 71 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 C1orf216Q8TAB5 229 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 SIPA1Q96FS4 1042 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 NT5C1BQ96P26 610 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 NUP58Q9BVL2 599 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 TMEM121BQ9BXQ6 578 aaPredicted RBP13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 SLC6A17Q9H1V8 727 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 FBRSQ9HAH7 460 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 SFMBT1Q9UHJ3 866 aa13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 ASCC3Q8N3C0 2202 aaKnown RBP13.19□□□□□ -0.3
TOP1MT-217ENST00000523417 A0A1B0GTW7 788 aa13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 BICDL2A1A5D9 508 aa13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 KCNJ18B7U540 433 aa13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 H0Y626 953 aa13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 TRIM16O95361 564 aa13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 BMP6P22004 513 aa13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 HLA-FP30511 346 aa13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 MAPK8P45983 427 aa13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 ATXN3P54252 364 aaPredicted RBP13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 ZBTB16Q05516 673 aa13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 LRMPQ12912 555 aa13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 NNTQ13423 1086 aa13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 MORC3Q14149 939 aa13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 PIK3R6Q5UE93 754 aa13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 NUGGCQ68CJ6 796 aa13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 TRIM59Q8IWR1 403 aa13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 HDDC3Q8N4P3 179 aa13.18□□□□□ -0.3
TOP1MT-217ENST00000523417 MINDY1Q8N5J2 469 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms