RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 FBXO28Q9NVF7 368 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 SH3BP4Q9P0V3 963 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 DAPP1Q9UN19 280 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 CNTN6Q9UQ52 1028 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 DGKBQ9Y6T7 804 aa5.62□□□□□ -1.51
SKP1-211ENST00000523359 CCDC187A0A096LP49 1063 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 GXYLT2A0PJZ3 443 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 M0QYT0 321 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 MASP2O00187 686 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 MBPP02686 304 aaPredicted RBP5.61□□□□□ -1.51
SKP1-211ENST00000523359 TMIGD3P0DMS9 266 aaPredicted RBP5.61□□□□□ -1.51
SKP1-211ENST00000523359 GALNSP34059 522 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 THBS4P35443 961 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 IGHMBP2P38935 993 aaKnown RBP5.61□□□□□ -1.51
SKP1-211ENST00000523359 CLK3P49761 638 aaKnown RBP5.61□□□□□ -1.51
SKP1-211ENST00000523359 PRKAA2P54646 552 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 GPC5P78333 572 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 LMOD3Q0VAK6 560 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 SF3A3Q12874 501 aaKnown RBP eCLIP5.61□□□□□ -1.51
SKP1-211ENST00000523359 NFRKBQ6P4R8 1299 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 C16orf89Q6UX73 402 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 RAB11FIP2Q7L804 512 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 BCDIN3DQ7Z5W3 292 aaKnown RBP5.61□□□□□ -1.51
SKP1-211ENST00000523359 ZNF354CQ86Y25 554 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 CPXCR1Q8N123 301 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 HMGB4Q8WW32 186 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 C3orf49Q96BT1 292 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 REPS1Q96D71 796 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 DAZAP1Q96EP5 407 aaKnown RBP5.61□□□□□ -1.51
SKP1-211ENST00000523359 EDC3Q96F86 508 aaKnown RBP5.61□□□□□ -1.51
SKP1-211ENST00000523359 REXO5Q96IC2 774 aaKnown RBP5.61□□□□□ -1.51
SKP1-211ENST00000523359 TRAPPC9Q96Q05 1148 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 DDX23Q9BUQ8 820 aaKnown RBP5.61□□□□□ -1.51
SKP1-211ENST00000523359 MECRQ9BV79 373 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 CCDC134Q9H6E4 229 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 RXFP3Q9NSD7 469 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 TFCP2L1Q9NZI6 479 aa5.61□□□□□ -1.51
SKP1-211ENST00000523359 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.61□□□□□ -1.51
SKP1-211ENST00000523359 ARHGEF17Q96PE2 2063 aaPredicted RBP5.6□□□□□ -1.51
SKP1-211ENST00000523359 LOC105369274A0A096LPK9 316 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 LOC102723532A0A0G2JNH3 316 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 TIMM44O43615 452 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 JTBO76095 146 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 APEHP13798 732 aaKnown RBP5.6□□□□□ -1.51
SKP1-211ENST00000523359 WT1P19544 449 aaPredicted RBP5.6□□□□□ -1.51
SKP1-211ENST00000523359 MMP8P22894 467 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 RAE1P78406 368 aaKnown RBP5.6□□□□□ -1.51
SKP1-211ENST00000523359 HOXA4Q00056 320 aaPredicted RBP5.6□□□□□ -1.51
SKP1-211ENST00000523359 CFHR3Q02985 330 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 BIRC3Q13489 604 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 RPS6KA2Q15349 733 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 FAM187BQ17R55 369 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 TTC22Q5TAA0 569 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 ANKRD40Q6AI12 368 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 ACSM6Q6P461 480 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 TRIM72Q6ZMU5 477 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 MOGAT3Q86VF5 341 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 ARHGEF25Q86VW2 580 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 OR4N4Q8N0Y3 316 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 LINC01465Q8N7H1 131 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 C1orf131Q8NDD1 294 aaKnown RBP5.6□□□□□ -1.51
SKP1-211ENST00000523359 MAFAQ8NHW3 353 aaPredicted RBP5.6□□□□□ -1.51
SKP1-211ENST00000523359 NPIPB3Q92617 1050 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 RILPL2Q969X0 211 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 SNX18Q96RF0 628 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 TAF1DQ9H5J8 278 aaPredicted RBP5.6□□□□□ -1.51
SKP1-211ENST00000523359 ASIC5Q9NY37 505 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 KIF17Q9P2E2 1029 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 SERGEFQ9UGK8 458 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 NFU1Q9UMS0 254 aa5.6□□□□□ -1.51
SKP1-211ENST00000523359 C19orf53Q9UNZ5 99 aaPredicted RBP5.6□□□□□ -1.51
SKP1-211ENST00000523359 UBE2J1Q9Y385 318 aaPredicted RBP5.6□□□□□ -1.51
SKP1-211ENST00000523359 RPGRIP1LQ68CZ1 1315 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 H0Y3Z8 333 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 FYB1O15117 783 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 IRAK2O43187 625 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 ANP32CO43423 234 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 PEPDP12955 493 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 GPD1P21695 349 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 LMO1P25800 156 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 CST5P28325 142 aaPredicted RBP5.59□□□□□ -1.51
SKP1-211ENST00000523359 ARL4CP56559 192 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 SOX10P56693 466 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 RNASELQ05823 741 aaKnown RBP5.59□□□□□ -1.51
SKP1-211ENST00000523359 CUL4BQ13620 913 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 MFSD13AQ14CX5 517 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 AAK1Q2M2I8 961 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 SERPINA13PQ6UXR4 307 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 RFX8Q6ZV50 586 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 CSGALNACT1Q8TDX6 532 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 KAZALD1Q96I82 304 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 HS6ST2Q96MM7 605 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 PRDM13Q9H4Q3 707 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 SAYSD1Q9NPB0 183 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 KCNK9Q9NPC2 374 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 ABHD10Q9NUJ1 306 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 RAB21Q9UL25 225 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 FZD4Q9ULV1 537 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 INSL6Q9Y581 213 aa5.59□□□□□ -1.51
SKP1-211ENST00000523359 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms