RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 TBX20Q9UMR3 447 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 CCL26Q9Y258 94 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 GDAQ9Y2T3 454 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 PTPN13Q12923 2485 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 HELZP42694 1942 aaKnown RBP7.21□□□□□ -1.25
SDCBP-210ENST00000522843 A0A087WV48 116 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 PODXLO00592 558 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 SYN3O14994 580 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 TRAPPC3O43617 180 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 SH3BP5O60239 455 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 GJB3O75712 270 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 SOAT2O75908 522 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 SLITRK3O94933 977 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 FTH1P19P0C7X4 201 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 DRD1P21728 446 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 ARL4AP40617 200 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 CYP4A11Q02928 519 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 EPHA7Q15375 998 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 USP39Q53GS9 565 aaKnown RBP7.21□□□□□ -1.26
SDCBP-210ENST00000522843 XKR4Q5GH76 650 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 GALNT18Q6P9A2 607 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 MOXD1Q6UVY6 613 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 PCSK4Q6UW60 755 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 ALKAL1Q6UXT8 129 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 NLRC3Q7RTR2 1065 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 TMC3Q7Z5M5 1100 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 DNAJB7Q7Z6W7 309 aaPredicted RBP7.21□□□□□ -1.26
SDCBP-210ENST00000522843 SLCO6A1Q86UG4 719 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 BICD2Q8TD16 824 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 CCDC12Q8WUD4 166 aaPredicted RBP7.21□□□□□ -1.26
SDCBP-210ENST00000522843 RLN3Q8WXF3 142 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 CNOT6LQ96LI5 555 aaKnown RBP7.21□□□□□ -1.26
SDCBP-210ENST00000522843 UROC1Q96N76 676 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 PGLYRP2Q96PD5 576 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 HNRNPABQ99729 332 aaKnown RBP7.21□□□□□ -1.26
SDCBP-210ENST00000522843 SPON2Q9BUD6 331 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 BDH2Q9BUT1 245 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 NUSAP1Q9BXS6 441 aaKnown RBP7.21□□□□□ -1.26
SDCBP-210ENST00000522843 SLC46A2Q9BY10 475 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 CCDC113Q9H0I3 377 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.21□□□□□ -1.26
SDCBP-210ENST00000522843 CAPN10Q9HC96 672 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 PRMT7Q9NVM4 692 aaPredicted RBP7.21□□□□□ -1.26
SDCBP-210ENST00000522843 TNFRSF10DQ9UBN6 386 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 DKK4Q9UBT3 224 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 DDX25Q9UHL0 483 aaKnown RBP7.21□□□□□ -1.26
SDCBP-210ENST00000522843 PILRBQ9UKJ0 227 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 GOLGA4Q13439 2230 aaKnown RBP7.21□□□□□ -1.26
SDCBP-210ENST00000522843 MGAQ8IWI9 3026 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 ATMQ13315 3056 aa7.21□□□□□ -1.26
SDCBP-210ENST00000522843 NID2Q14112 1375 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 H7C4K7 107 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 DKC1O60832 514 aaKnown RBP eCLIP7.2□□□□□ -1.26
SDCBP-210ENST00000522843 CDC45O75419 566 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 GABRR2P28476 465 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 GJA4P35212 333 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 P2RY2P41231 377 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 RARRES1P49788 294 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 ZNF165P49910 485 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 RCAN1P53805 252 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 LAPTM5Q13571 262 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 TRIP6Q15654 476 aaKnown RBP7.2□□□□□ -1.26
SDCBP-210ENST00000522843 ADCK5Q3MIX3 580 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 NT5DC1Q5TFE4 455 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 ANO7Q6IWH7 933 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 ZPBP2Q6X784 338 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 OTUD6AQ7L8S5 288 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 TMC6Q7Z403 805 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 TMEM150AQ86TG1 271 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 SYT12Q8IV01 421 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 MINDY1Q8N5J2 469 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 TSTD1Q8NFU3 115 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 USP13Q92995 863 aaPredicted RBP7.2□□□□□ -1.26
SDCBP-210ENST00000522843 PSMG2Q969U7 264 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 C18orf25Q96B23 403 aaPredicted RBP7.2□□□□□ -1.26
SDCBP-210ENST00000522843 P2RY13Q9BPV8 354 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 GTPBP2Q9BX10 602 aaKnown RBP7.2□□□□□ -1.26
SDCBP-210ENST00000522843 TASP1Q9H6P5 420 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 ZSWIM4Q9H7M6 989 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 MAFFQ9ULX9 164 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 PCDHA5Q9Y5H7 936 aa7.2□□□□□ -1.26
SDCBP-210ENST00000522843 USP9XQ93008 2570 aaPredicted RBP7.2□□□□□ -1.26
SDCBP-210ENST00000522843 NBPF19A0A087WUL8 3843 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 DENND4CQ5VZ89 1909 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 PLXND1Q9Y4D7 1925 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 LRRIQ4A6NIV6 560 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 FADS2P1A8MWK0 482 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 PYCARD-AS1I3L0S3 204 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 K7EQS6 105 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 ACKR2O00590 384 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 BUB1BO60566 1050 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-210ENST00000522843 OPHN1O60890 802 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 CBFA2T3O75081 653 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 LYPLA2O95372 231 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 SYPP08247 313 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 CPA1P15085 419 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 NME1P15531 152 aaKnown RBP7.19□□□□□ -1.26
SDCBP-210ENST00000522843 ITPKBP27987 946 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 KCNC1P48547 511 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms