RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 ZNF662Q6ZS27 426 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 GPR149Q86SP6 731 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 PABPC5Q96DU9 382 aaKnown RBP12.85□□□□□ -0.35
PABPC1-219ENST00000522387 PRDM6Q9NQX0 595 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 DNMT3LQ9UJW3 386 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 AMFRQ9UKV5 643 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 CPQQ9Y646 472 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 WDFY4Q6ZS81 3184 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 TRDMT1O14717 391 aaKnown RBP12.85□□□□□ -0.35
PABPC1-219ENST00000522387 PRPSAP2O60256 369 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 CD48P09326 243 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 RDXP35241 583 aaKnown RBP12.85□□□□□ -0.35
PABPC1-219ENST00000522387 ACTN2P35609 894 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 TFF2Q03403 129 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 CA9Q16790 459 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 PRSS36Q5K4E3 855 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 ATAT1Q5SQI0 421 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 SCML4Q8N228 414 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 HDAC7Q8WUI4 952 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 FGF13Q92913 245 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 NT5C3BQ969T7 300 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 TSPYL1Q9H0U9 437 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 WDR6Q9NNW5 1121 aaKnown RBP12.85□□□□□ -0.35
PABPC1-219ENST00000522387 DZANK1Q9NVP4 752 aa12.85□□□□□ -0.35
PABPC1-219ENST00000522387 IRAK2O43187 625 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 PRAMEF12O95522 483 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 SCNN1AP37088 669 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 VIPR2P41587 438 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 PTPN9P43378 593 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 TBX4P57082 545 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 C2orf54Q08AI8 447 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 TMEM184AQ6ZMB5 413 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 DENND1CQ8IV53 801 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 FNIP1Q8TF40 1166 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 ALG3Q92685 438 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 RNF25Q96BH1 459 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-219ENST00000522387 MS4A14Q96JA4 679 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 CEP295NLQ96MC4 621 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 S1PR5Q9H228 398 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 SMOC2Q9H3U7 446 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 POMKQ9H5K3 350 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.84□□□□□ -0.35
PABPC1-219ENST00000522387 OBSL1O75147 1896 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 CREB3O43889 395 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 DESP17661 470 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 FSHRP23945 695 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 GBP2P32456 591 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-219ENST00000522387 HADHBP55084 474 aaKnown RBP12.84□□□□□ -0.35
PABPC1-219ENST00000522387 SLC25A11Q02978 314 aaKnown RBP12.84□□□□□ -0.35
PABPC1-219ENST00000522387 HSP90B2PQ58FF3 399 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 C11orf63Q6NUN7 778 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 WDR93Q6P2C0 686 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 ADAT2Q7Z6V5 191 aaKnown RBP12.84□□□□□ -0.35
PABPC1-219ENST00000522387 CCDC50Q8IVM0 306 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 ARID3BQ8IVW6 561 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-219ENST00000522387 CMTM8Q8IZV2 173 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 SYCE1Q8N0S2 351 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 NETO2Q8NC67 525 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 RIN3Q8TB24 985 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 ZSCAN18Q8TBC5 510 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-219ENST00000522387 SERPINB11Q96P15 392 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 TLR10Q9BXR5 811 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 DHX35Q9H5Z1 703 aaKnown RBP12.84□□□□□ -0.35
PABPC1-219ENST00000522387 COMMD8Q9NX08 183 aa12.84□□□□□ -0.35
PABPC1-219ENST00000522387 GOLGA6L7A0A1B0GV03 622 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 FAM72CH0Y354 149 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 KCNK3O14649 394 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 RARAP10276 462 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 POU3F3P20264 500 aaPredicted RBP12.83□□□□□ -0.36
PABPC1-219ENST00000522387 VCPP55072 806 aaKnown RBP12.83□□□□□ -0.36
PABPC1-219ENST00000522387 ODF2Q5BJF6 829 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 FAM72AQ5TYM5 149 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 SNX30Q5VWJ9 437 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 FAM72DQ6L9T8 149 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 LEKR1Q6ZMV7 388 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 CYP4V2Q6ZWL3 525 aaPredicted RBP12.83□□□□□ -0.36
PABPC1-219ENST00000522387 SND1Q7KZF4 910 aaKnown RBP eCLIP12.83□□□□□ -0.36
PABPC1-219ENST00000522387 ARCQ7LC44 396 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 FAM72BQ86X60 149 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 FAM71BQ8TC56 605 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 OVCA2Q8WZ82 227 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 CENPIQ92674 756 aaPredicted RBP12.83□□□□□ -0.36
PABPC1-219ENST00000522387 MSLNLQ96KJ4 702 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 SNRNP25Q9BV90 132 aaKnown RBP12.83□□□□□ -0.36
PABPC1-219ENST00000522387 CALN1Q9BXU9 219 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 ACBD3Q9H3P7 528 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 FEZ2Q9UHY8 353 aaPredicted RBP12.83□□□□□ -0.36
PABPC1-219ENST00000522387 JRKLQ9Y4A0 524 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 TRAV19A0A0A6YYK7 116 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 DPYSL4O14531 572 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 KLKB1P03952 638 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 HOXB8P17481 243 aaPredicted RBP12.83□□□□□ -0.36
PABPC1-219ENST00000522387 CCR1P32246 355 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 GBP1P32455 592 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 EPHA5P54756 1037 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 MMRN1Q13201 1228 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 TCEAL1Q15170 157 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 RPS6KA1Q15418 735 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 ARHGAP15Q53QZ3 475 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 FAM182AQ5T1J6 154 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms