RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 ANKRD52Q8NB46 1076 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 DTWD2Q8NBA8 298 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 C3orf20Q8ND61 904 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 ACTRT1Q8TDG2 376 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 MARVELD3Q96A59 401 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 MSANTD3Q96H12 275 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 ZFRQ96KR1 1074 aaKnown RBP7.12□□□□□ -1.27
SPIDR-218ENST00000522222 FAM83CQ9BQN1 747 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 TLR10Q9BXR5 811 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 CAPS2Q9BXY5 557 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 RNF38Q9H0F5 515 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 GANQ9H2C0 597 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 FBXO44Q9H4M3 255 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 EBF3Q9H4W6 596 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 CCSER2Q9H7U1 834 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 NMUR1Q9HB89 426 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 SIX2Q9NPC8 291 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 GKN1Q9NS71 199 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 THG1LQ9NWX6 298 aaKnown RBP7.12□□□□□ -1.27
SPIDR-218ENST00000522222 OSER1Q9NX31 292 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 GTSE1Q9NYZ3 720 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 DLGAP2Q9P1A6 1054 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 CFAP97Q9P2B7 532 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 HESX1Q9UBX0 185 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 APEX2Q9UBZ4 518 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 NDRG2Q9UN36 371 aaKnown RBP7.12□□□□□ -1.27
SPIDR-218ENST00000522222 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.12□□□□□ -1.277e-6■■■■■ 27.7
SPIDR-218ENST00000522222 SCML2Q9UQR0 700 aa7.12□□□□□ -1.27
SPIDR-218ENST00000522222 MTF2Q9Y483 593 aaPredicted RBP7.12□□□□□ -1.27
SPIDR-218ENST00000522222 OTOL1A6NHN0 477 aaPredicted RBP7.11□□□□□ -1.27
SPIDR-218ENST00000522222 FAM170BA6NMN3 283 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 PGRMC1O00264 195 aaKnown RBP7.11□□□□□ -1.27
SPIDR-218ENST00000522222 PDE2AO00408 941 aaPredicted RBP7.11□□□□□ -1.27
SPIDR-218ENST00000522222 MAN2B1O00754 1011 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 XPO1O14980 1071 aaKnown RBP7.11□□□□□ -1.27
SPIDR-218ENST00000522222 MDM4O15151 490 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 EIF3HO15372 352 aaKnown RBP eCLIP7.11□□□□□ -1.27
SPIDR-218ENST00000522222 PLEKP08567 350 aaPredicted RBP7.11□□□□□ -1.27
SPIDR-218ENST00000522222 SETSIPP0DME0 302 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 IRF1P10914 325 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 GLULP15104 373 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 PON1P27169 355 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 PTPN5P54829 565 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 ADIGQ0VDE8 80 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 PDGFRLQ15198 375 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 ITPRIPL2Q3MIP1 535 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 PKDCCQ504Y2 493 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 SNX30Q5VWJ9 437 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 NAIF1Q69YI7 327 aaPredicted RBP7.11□□□□□ -1.27
SPIDR-218ENST00000522222 TXNDC11Q6PKC3 985 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 LCLAT1Q6UWP7 414 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 ZNF852Q6ZMS4 543 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 ENOSF1Q7L5Y1 443 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 BHLHA9Q7RTU4 235 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 MAATS1Q7Z4T9 603 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 SCD5Q86SK9 330 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 DDX42Q86XP3 938 aaKnown RBP eCLIP7.11□□□□□ -1.27
SPIDR-218ENST00000522222 ZNF687Q8N1G0 1237 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 CPA6Q8N4T0 437 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 CCDC26Q8TAB7 109 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 UBA3Q8TBC4 463 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 OSCP1Q8WVF1 389 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 FAM3CQ92520 227 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 CHFRQ96EP1 664 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 RUNDC3BQ96NL0 473 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 LRRC1Q9BTT6 524 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 KRTAP3-3Q9BYR6 98 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 KRTAP3-2Q9BYR7 98 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 ULBP1Q9BZM6 244 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 FAM129AQ9BZQ8 928 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 NACA2Q9H009 215 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 KCNH6Q9H252 994 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 C8orf33Q9H7E9 229 aaPredicted RBP7.11□□□□□ -1.27
SPIDR-218ENST00000522222 UBE2TQ9NPD8 197 aaPredicted RBP7.11□□□□□ -1.27
SPIDR-218ENST00000522222 CYLDQ9NQC7 956 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 TLR8Q9NR97 1041 aaKnown RBP7.11□□□□□ -1.27
SPIDR-218ENST00000522222 DUS2Q9NX74 493 aaKnown RBP7.11□□□□□ -1.27
SPIDR-218ENST00000522222 CHORDC1Q9UHD1 332 aaPredicted RBP7.11□□□□□ -1.27
SPIDR-218ENST00000522222 GGA2Q9UJY4 613 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 CNTN6Q9UQ52 1028 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 MRPS17Q9Y2R5 130 aaKnown RBP7.11□□□□□ -1.27
SPIDR-218ENST00000522222 SIT1Q9Y3P8 196 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 USP3Q9Y6I4 520 aa7.11□□□□□ -1.27
SPIDR-218ENST00000522222 A0A087WUV0 522 aaPredicted RBP7.1□□□□□ -1.27
SPIDR-218ENST00000522222 GOLGA6L10A0A0M3HER8 536 aa7.1□□□□□ -1.27
SPIDR-218ENST00000522222 EPHB6O15197 1021 aa7.1□□□□□ -1.27
SPIDR-218ENST00000522222 ZNF185O15231 689 aa7.1□□□□□ -1.27
SPIDR-218ENST00000522222 PALMO75781 387 aa7.1□□□□□ -1.27
SPIDR-218ENST00000522222 HEXIM1O94992 359 aaKnown RBP7.1□□□□□ -1.27
SPIDR-218ENST00000522222 TBX18O95935 607 aa7.1□□□□□ -1.27
SPIDR-218ENST00000522222 CYP17A1P05093 508 aa7.1□□□□□ -1.27
SPIDR-218ENST00000522222 H2AFZP0C0S5 128 aa7.1□□□□□ -1.27
SPIDR-218ENST00000522222 UCHL3P15374 230 aa7.1□□□□□ -1.27
SPIDR-218ENST00000522222 STAT1P42224 750 aa7.1□□□□□ -1.27
SPIDR-218ENST00000522222 RGS7P49802 495 aa7.1□□□□□ -1.27
SPIDR-218ENST00000522222 TKTL1P51854 596 aa7.1□□□□□ -1.27
SPIDR-218ENST00000522222 MFAP3P55082 362 aa7.1□□□□□ -1.27
SPIDR-218ENST00000522222 SLC8A3P57103 927 aa7.1□□□□□ -1.27
SPIDR-218ENST00000522222 CORO7P57737 925 aa7.1□□□□□ -1.27
SPIDR-218ENST00000522222 NHLH1Q02575 133 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms