RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 MIS18BP1Q6P0N0 1132 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 CHSY1Q86X52 802 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 CCDC117Q8IWD4 279 aaPredicted RBP4.64□□□□□ -1.67
SQLE-204ENST00000520493 ABHD5Q8WTS1 349 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 TMEM171Q8WVE6 324 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 SNRNP27Q8WVK2 155 aaKnown RBP4.64□□□□□ -1.67
SQLE-204ENST00000520493 THAP4Q8WY91 577 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 FYTTD1Q96QD9 318 aaKnown RBP4.64□□□□□ -1.67
SQLE-204ENST00000520493 MACROD1Q9BQ69 325 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 C17orf80Q9BSJ5 609 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 CIPCQ9C0C6 399 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 PABPC3Q9H361 631 aaKnown RBP4.64□□□□□ -1.67
SQLE-204ENST00000520493 PRDM8Q9NQV8 689 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 RASSF1Q9NS23 344 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 SRP68Q9UHB9 627 aaKnown RBP4.64□□□□□ -1.67
SQLE-204ENST00000520493 AMFRQ9UKV5 643 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 NFU1Q9UMS0 254 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 USP22Q9UPT9 525 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 TBC1D30Q9Y2I9 924 aa4.64□□□□□ -1.67
SQLE-204ENST00000520493 AP4M1O00189 453 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 EIF3FO00303 357 aaPredicted RBP4.63□□□□□ -1.67
SQLE-204ENST00000520493 EXOC5O00471 708 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 RGS10O43665 173 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 RASAL1O95294 804 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 NHLRC4P0CG21 123 aaPredicted RBP4.63□□□□□ -1.67
SQLE-204ENST00000520493 EPHA3P29320 983 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 ADD2P35612 726 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 MMP13P45452 471 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 MCM2P49736 904 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 PAPOLAP51003 745 aaKnown RBP4.63□□□□□ -1.67
SQLE-204ENST00000520493 ALDH18A1P54886 795 aaKnown RBP4.63□□□□□ -1.67
SQLE-204ENST00000520493 AP2B1P63010 937 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 SSBP2P81877 361 aaPredicted RBP4.63□□□□□ -1.67
SQLE-204ENST00000520493 TLE2Q04725 743 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 ARHGAP15Q53QZ3 475 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 CEP78Q5JTW2 689 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 TMEM63BQ5T3F8 832 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 CACHD1Q5VU97 1274 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 LIN54Q6MZP7 749 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 MOGAT3Q86VF5 341 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 RASGRP3Q8IV61 690 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 CNGA4Q8IV77 575 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 SLC44A2Q8IWA5 706 aaPredicted RBP4.63□□□□□ -1.67
SQLE-204ENST00000520493 SFTPA1Q8IWL2 248 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 TMTC2Q8N394 836 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 GALNT16Q8N428 558 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 C9orf106Q8NAJ2 232 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 OR6Y1Q8NGX8 325 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 C5orf34Q96MH7 638 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 PYM1Q9BRP8 204 aaKnown RBP4.63□□□□□ -1.67
SQLE-204ENST00000520493 RTKNQ9BST9 563 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 SLC25A32Q9H2D1 315 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 GBA2Q9HCG7 927 aaPredicted RBP4.63□□□□□ -1.67
SQLE-204ENST00000520493 DNAJB11Q9UBS4 358 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 NRBP1Q9UHY1 535 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 HPSEQ9Y251 543 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 ITIH6Q6UXX5 1313 aa4.63□□□□□ -1.67
SQLE-204ENST00000520493 EFCAB8A8MWE9 144 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 CES2O00748 559 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 CD3EAPO15446 510 aaKnown RBP4.62□□□□□ -1.67
SQLE-204ENST00000520493 TIMM44O43615 452 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 SRGAP2O75044 1071 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 GCATO75600 419 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 RNF8O76064 485 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 ACTL6BO94805 426 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 TNFRSF6BO95407 300 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 BMP15O95972 392 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 VIPP01282 170 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 ANXA6P08133 673 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 PECAM1P16284 738 aaPredicted RBP4.62□□□□□ -1.67
SQLE-204ENST00000520493 TNFAIP3P21580 790 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 RXRGP48443 463 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 BCAT1P54687 386 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 KCTD2Q14681 263 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 CYP1B1Q16678 543 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 LY6KQ17RY6 165 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 FAM110CQ1W6H9 321 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 SULT6B1Q6IMI4 303 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 DPY19L3Q6ZPD9 716 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 MAATS1Q7Z4T9 603 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 TTC30AQ86WT1 665 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 HERC6Q8IVU3 1022 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 FTSJ3Q8IY81 847 aaKnown RBP4.62□□□□□ -1.67
SQLE-204ENST00000520493 C8orf58Q8NAV2 365 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 NGDNQ8NEJ9 315 aaKnown RBP4.62□□□□□ -1.67
SQLE-204ENST00000520493 MBD3L2Q8NHZ7 208 aaPredicted RBP4.62□□□□□ -1.67
SQLE-204ENST00000520493 WDR60Q8WVS4 1066 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 RUBCNQ92622 972 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 RITA1Q96K30 269 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 LENG8Q96PV6 779 aaPredicted RBP4.62□□□□□ -1.67
SQLE-204ENST00000520493 PRR25Q96S07 402 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 EIF2AK1Q9BQI3 630 aaKnown RBP4.62□□□□□ -1.67
SQLE-204ENST00000520493 SH2D3AQ9BRG2 576 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 THAP7Q9BT49 309 aaPredicted RBP4.62□□□□□ -1.67
SQLE-204ENST00000520493 QTRT1Q9BXR0 403 aaKnown RBP4.62□□□□□ -1.67
SQLE-204ENST00000520493 TWSG1Q9GZX9 223 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 TRIM36Q9NQ86 728 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 WASH6PQ9NQA3 447 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 SNX15Q9NRS6 342 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 RXFP3Q9NSD7 469 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms