RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 PDK4Q16654 411 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 SKIDA1Q1XH10 827 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 KLHL38Q2WGJ6 581 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 PREPLQ4J6C6 727 aaPredicted RBP5.26□□□□□ -1.57
SDC2-204ENST00000519914 ATP13A4Q4VNC1 1196 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 ZNF667Q5HYK9 610 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 HP1BP3Q5SSJ5 553 aaPredicted RBP5.26□□□□□ -1.57
SDC2-204ENST00000519914 EEF1DP3Q658K8 133 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 SCARA3Q6AZY7 606 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 DENND1BQ6P3S1 775 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 CYB5D1Q6P9G0 228 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 DCUN1D2Q6PH85 259 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 CYP4V2Q6ZWL3 525 aaPredicted RBP5.26□□□□□ -1.57
SDC2-204ENST00000519914 ASRGL1Q7L266 308 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 ARCQ7LC44 396 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 SPATA21Q7Z572 469 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 SPRED2Q7Z698 418 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 DEFB132Q7Z7B7 95 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 CCDC25Q86WR0 208 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 ERO1BQ86YB8 467 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 GLIS1Q8NBF1 620 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 RNF149Q8NC42 400 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 CFAP61Q8NHU2 1237 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 MZB1Q8WU39 189 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 TEKT4Q8WW24 435 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 CPT1BQ92523 772 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 ALKBH8Q96BT7 664 aaKnown RBP5.26□□□□□ -1.57
SDC2-204ENST00000519914 FAF2Q96CS3 445 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 MCEEQ96PE7 176 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 ELAC2Q9BQ52 826 aaKnown RBP5.26□□□□□ -1.57
SDC2-204ENST00000519914 HEMGNQ9BXL5 484 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 ASCC2Q9H1I8 757 aaPredicted RBP5.26□□□□□ -1.57
SDC2-204ENST00000519914 MROH8Q9H579 483 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 RPF1Q9H9Y2 349 aaKnown RBP5.26□□□□□ -1.57
SDC2-204ENST00000519914 ZFYVE1Q9HBF4 777 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 RXFP1Q9HBX9 757 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 SAYSD1Q9NPB0 183 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 BATF3Q9NR55 127 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 ARHGEF3Q9NR81 526 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 ADARB2Q9NS39 739 aaKnown RBP5.26□□□□□ -1.57
SDC2-204ENST00000519914 NKIRAS1Q9NYS0 192 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 CPSF2Q9P2I0 782 aaKnown RBP5.26□□□□□ -1.57
SDC2-204ENST00000519914 PSMC3IPQ9P2W1 217 aaPredicted RBP5.26□□□□□ -1.57
SDC2-204ENST00000519914 CTNNAL1Q9UBT7 734 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 CYTH4Q9UIA0 394 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 ITGA11Q9UKX5 1188 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 RPL26L1Q9UNX3 145 aaKnown RBP5.26□□□□□ -1.57
SDC2-204ENST00000519914 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.26□□□□□ -1.57
SDC2-204ENST00000519914 AGTPBP1Q9UPW5 1226 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 SLC5A6Q9Y289 635 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 DERAQ9Y315 318 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 C2CD2Q9Y426 696 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 SCN1AP35498 2009 aa5.26□□□□□ -1.57
SDC2-204ENST00000519914 EXOC1LA0A1B0GW35 172 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 CFAP69A5D8W1 941 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 ASB14A6NK59 587 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 SMIM23A6NLE4 172 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 C2CD4BA6NLJ0 364 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 TCP11X1B4DZS4 312 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 RASA4BC9J798 803 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 TRAFD1O14545 582 aaPredicted RBP5.25□□□□□ -1.57
SDC2-204ENST00000519914 TM9SF1O15321 606 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 CHADO15335 359 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 RASA4O43374 803 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 EDF1O60869 148 aaKnown RBP5.25□□□□□ -1.57
SDC2-204ENST00000519914 TOMM70O94826 608 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 ZWINTO95229 277 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 TRUB2O95900 331 aaKnown RBP5.25□□□□□ -1.57
SDC2-204ENST00000519914 VIMP08670 466 aaKnown RBP5.25□□□□□ -1.57
SDC2-204ENST00000519914 GSTA2P09210 222 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 DHRS4L1P0CG22 281 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 KRT3P12035 628 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 KRT10P13645 584 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 P4HA1P13674 534 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 NQO1P15559 274 aaKnown RBP5.25□□□□□ -1.57
SDC2-204ENST00000519914 JUNBP17275 347 aaPredicted RBP5.25□□□□□ -1.57
SDC2-204ENST00000519914 TGM2P21980 687 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 STIP1P31948 543 aaKnown RBP5.25□□□□□ -1.57
SDC2-204ENST00000519914 FOXN2P32314 431 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 SLC8A1P32418 973 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 STX2P32856 288 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 PHBP35232 272 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 NF2P35240 595 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 RFC1P35251 1148 aaPredicted RBP5.25□□□□□ -1.57
SDC2-204ENST00000519914 GPD2P43304 727 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 MAGEA8P43361 318 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 MNAT1P51948 309 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 ARL4CP56559 192 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 GPX6P59796 221 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 PSMC1P62191 440 aaKnown RBP5.25□□□□□ -1.57
SDC2-204ENST00000519914 LACTBP83111 547 aaPredicted RBP5.25□□□□□ -1.57
SDC2-204ENST00000519914 OTUD4Q01804 1114 aaKnown RBP5.25□□□□□ -1.57
SDC2-204ENST00000519914 MYO1EQ12965 1108 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 GPS1Q13098 491 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 TMED1Q13445 227 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 SPARCL1Q14515 664 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 KCNJ11Q14654 390 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 TTLL4Q14679 1199 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 PDK2Q15119 407 aa5.25□□□□□ -1.57
SDC2-204ENST00000519914 NOMO1Q15155 1222 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms