RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 SEMA6AQ9H2E6 1030 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 VPS28Q9UK41 221 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 PTBP2Q9UKA9 531 aaKnown RBP13.94□□□□□ -0.18
PABPC1-208ENST00000519004 USTQ9Y2C2 406 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 TRAF6Q9Y4K3 522 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 PCDHGA11Q9Y5H2 935 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 UBE4BO95155 1302 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 TTC34A8MYJ7 566 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 MSI1O43347 362 aaKnown RBP13.94□□□□□ -0.18
PABPC1-208ENST00000519004 HTRA2O43464 458 aaPredicted RBP13.94□□□□□ -0.18
PABPC1-208ENST00000519004 GCATO75600 419 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 GSRP00390 522 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 SNRPAP09012 282 aaKnown RBP13.94□□□□□ -0.18
PABPC1-208ENST00000519004 PRDX5P30044 214 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 NUDT2P50583 147 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 GPC3P51654 580 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 VAMP7P51809 220 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 GDF10P55107 478 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 ATP6V0D1P61421 351 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 WDR45BQ5MNZ6 344 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 ZNF618Q5T7W0 954 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 MBLAC2Q68D91 279 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 PLA2G4FQ68DD2 849 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 PPP1R18Q6NYC8 613 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 BNC2Q6ZN30 1099 aaPredicted RBP13.94□□□□□ -0.18
PABPC1-208ENST00000519004 RFPL4BQ6ZWI9 263 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 SLC9A9Q8IVB4 645 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 TAB3Q8N5C8 712 aaPredicted RBP13.94□□□□□ -0.18
PABPC1-208ENST00000519004 ORAI2Q96SN7 254 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 C1orf50Q9BV19 199 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 SMARCAD1Q9H4L7 1026 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 DHX33Q9H6R0 707 aaKnown RBP13.94□□□□□ -0.18
PABPC1-208ENST00000519004 NANOGQ9H9S0 305 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 CD209Q9NNX6 404 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 PNPOQ9NVS9 261 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 DUS2Q9NX74 493 aaKnown RBP13.94□□□□□ -0.18
PABPC1-208ENST00000519004 BCAP29Q9UHQ4 241 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 ATF5Q9Y2D1 282 aaPredicted RBP13.94□□□□□ -0.18
PABPC1-208ENST00000519004 COL24A1Q17RW2 1714 aa13.94□□□□□ -0.18
PABPC1-208ENST00000519004 SPAG6O75602 509 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 BCAS2O75934 225 aaPredicted RBP13.93□□□□□ -0.18
PABPC1-208ENST00000519004 PARNO95453 639 aaKnown RBP13.93□□□□□ -0.18
PABPC1-208ENST00000519004 SERPINB2P05120 415 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 UBL4AP11441 157 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 POLR2BP30876 1174 aaKnown RBP13.93□□□□□ -0.18
PABPC1-208ENST00000519004 TTKP33981 857 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 BMPR1AP36894 532 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 HPCAL1P37235 193 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 TUFMP49411 452 aaKnown RBP13.93□□□□□ -0.18
PABPC1-208ENST00000519004 MRPS9P82933 396 aaKnown RBP13.93□□□□□ -0.18
PABPC1-208ENST00000519004 FAM47CQ5HY64 1035 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 GET4Q7L5D6 327 aaPredicted RBP13.93□□□□□ -0.18
PABPC1-208ENST00000519004 ZNF720Q7Z2F6 126 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 PDIK1LQ8N165 341 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.93□□□□□ -0.18
PABPC1-208ENST00000519004 CAPSLQ8WWF8 208 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 HOXD1Q9GZZ0 328 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 SEPT3Q9UH03 358 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 ST14Q9Y5Y6 855 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 CROCCQ5TZA2 2017 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 COL18A1P39060 1754 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 AIM2O14862 343 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 GMNNO75496 209 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 TPPPO94811 219 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 TOP3BO95985 862 aaKnown RBP13.93□□□□□ -0.18
PABPC1-208ENST00000519004 ALOX5P09917 674 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 VDRP11473 427 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 FGF3P11487 239 aaPredicted RBP13.93□□□□□ -0.18
PABPC1-208ENST00000519004 TCF4P15884 667 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 FGFR3P22607 806 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 SLC1A6P48664 564 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 PKNOX1P55347 436 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 BMPR2Q13873 1038 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 FASTKD1Q53R41 847 aaKnown RBP13.93□□□□□ -0.18
PABPC1-208ENST00000519004 NHSL2Q5HYW2 709 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 PPM1LQ5SGD2 360 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 PERM1Q5SV97 790 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 ZNF280DQ6N043 979 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 C16orf89Q6UX73 402 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 POLNQ7Z5Q5 900 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 SLFN12Q8IYM2 578 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 DSELQ8IZU8 1212 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 CPA5Q8WXQ8 436 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 MBOAT7Q96N66 472 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 IMPG2Q9BZV3 1241 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 RABL2AQ9UBK7 228 aaPredicted RBP13.93□□□□□ -0.18
PABPC1-208ENST00000519004 NUP98P52948 1817 aa13.93□□□□□ -0.18
PABPC1-208ENST00000519004 CXorf49A8MYA2 514 aaPredicted RBP13.92□□□□□ -0.18
PABPC1-208ENST00000519004 ACOT8O14734 319 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 KRT37O76014 449 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 CLPXO76031 633 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 TGM1P22735 817 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 MFAP3P55082 362 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 DGKDQ16760 1214 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 MAMDC4Q6UXC1 1216 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 REM2Q8IYK8 340 aaPredicted RBP13.92□□□□□ -0.18
PABPC1-208ENST00000519004 RCOR2Q8IZ40 523 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 SIX6OS1Q8N1H7 587 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 ZNF786Q8N393 782 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 PPM1NQ8N819 430 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms