RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 GALNT4Q8N4A0 578 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 HMGB4Q8WW32 186 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 NPIPB3Q92617 1050 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 NELL1Q92832 810 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 GCC1Q96CN9 775 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 PRR11Q96HE9 360 aaPredicted RBP5.11□□□□□ -1.59
SQLE-202ENST00000518604 HIC2Q96JB3 615 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 HS6ST2Q96MM7 605 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 ADGRE3Q9BY15 652 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 CHMP4AQ9BY43 222 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 TWSG1Q9GZX9 223 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 TAF1DQ9H5J8 278 aaPredicted RBP5.11□□□□□ -1.59
SQLE-202ENST00000518604 CDCP1Q9H5V8 836 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 SEPSECSQ9HD40 501 aaKnown RBP5.11□□□□□ -1.59
SQLE-202ENST00000518604 ABHD10Q9NUJ1 306 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 ASB6Q9NWX5 421 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 ASIC5Q9NY37 505 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 SH3BP4Q9P0V3 963 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 ZNHIT2Q9UHR6 403 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 MAFFQ9ULX9 164 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 PCDHB7Q9Y5E2 793 aa5.11□□□□□ -1.59
SQLE-202ENST00000518604 TCRBV5S1A1TA0A578 114 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 MBD3L5A6NJ08 208 aaPredicted RBP5.1□□□□□ -1.59
SQLE-202ENST00000518604 KIF28PB7ZC32 967 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 H0Y3Z8 333 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 M0QZQ0 153 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 CLIC1O00299 241 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 MBPP02686 304 aaPredicted RBP5.1□□□□□ -1.59
SQLE-202ENST00000518604 CYP3A4P08684 503 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 ALADP13716 330 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 ATF7P17544 494 aaPredicted RBP5.1□□□□□ -1.59
SQLE-202ENST00000518604 THBS4P35443 961 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 AARSP49588 968 aaKnown RBP eCLIP5.1□□□□□ -1.59
SQLE-202ENST00000518604 CLK3P49761 638 aaKnown RBP5.1□□□□□ -1.59
SQLE-202ENST00000518604 LARS2Q15031 903 aaKnown RBP5.1□□□□□ -1.59
SQLE-202ENST00000518604 FBXO47Q5MNV8 452 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 WDR93Q6P2C0 686 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 TMEM65Q6PI78 240 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 SERPINA13PQ6UXR4 307 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 DCDC5Q6ZRR9 648 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 MOGAT3Q86VF5 341 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 MAFAQ8NHW3 353 aaPredicted RBP5.1□□□□□ -1.59
SQLE-202ENST00000518604 C3orf49Q96BT1 292 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 ZSCAN31Q96LW9 406 aaPredicted RBP5.1□□□□□ -1.59
SQLE-202ENST00000518604 MACROD1Q9BQ69 325 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 TMPRSS5Q9H3S3 457 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 ITM2CQ9NQX7 267 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 PCDHB2Q9Y5E7 798 aa5.1□□□□□ -1.59
SQLE-202ENST00000518604 C3orf70A6NLC5 250 aaPredicted RBP5.09□□□□□ -1.59
SQLE-202ENST00000518604 SLC38A8A6NNN8 435 aa5.09□□□□□ -1.59
SQLE-202ENST00000518604 FYB1O15117 783 aa5.09□□□□□ -1.59
SQLE-202ENST00000518604 GCATO75600 419 aa5.09□□□□□ -1.59
SQLE-202ENST00000518604 IGLV2-14P01704 120 aa5.09□□□□□ -1.59
SQLE-202ENST00000518604 TFRCP02786 760 aaKnown RBP5.09□□□□□ -1.59
SQLE-202ENST00000518604 SLC3A2P08195 630 aaKnown RBP5.09□□□□□ -1.59
SQLE-202ENST00000518604 SERPINA4P29622 427 aa5.09□□□□□ -1.59
SQLE-202ENST00000518604 RPL15P61313 204 aaKnown RBP5.09□□□□□ -1.59
SQLE-202ENST00000518604 WDR5P61964 334 aaKnown RBP5.09□□□□□ -1.59
SQLE-202ENST00000518604 RAE1P78406 368 aaKnown RBP5.09□□□□□ -1.59
SQLE-202ENST00000518604 KCNB1Q14721 858 aa5.09□□□□□ -1.59
SQLE-202ENST00000518604 MFSD13AQ14CX5 517 aa5.09□□□□□ -1.59
SQLE-202ENST00000518604 CNGA3Q16281 694 aa5.09□□□□□ -1.59
SQLE-202ENST00000518604 ANKRD45Q5TZF3 282 aa5.09□□□□□ -1.59
SQLE-202ENST00000518604 C16orf89Q6UX73 402 aa5.09□□□□□ -1.59
SQLE-202ENST00000518604 FTSJ3Q8IY81 847 aaKnown RBP5.09□□□□□ -1.59
SQLE-202ENST00000518604 FAM98AQ8NCA5 519 aaKnown RBP5.09□□□□□ -1.59
SQLE-202ENST00000518604 SRFBP1Q8NEF9 429 aaKnown RBP5.09□□□□□ -1.59
SQLE-202ENST00000518604 MCRS1Q96EZ8 462 aa5.09□□□□□ -1.59
SQLE-202ENST00000518604 NPAS1Q99742 590 aa5.09□□□□□ -1.59
SQLE-202ENST00000518604 MRIQ9BWK5 157 aa5.09□□□□□ -1.59
SQLE-202ENST00000518604 RIOX1Q9H6W3 641 aa5.09□□□□□ -1.59
SQLE-202ENST00000518604 G6PC2Q9NQR9 355 aa5.09□□□□□ -1.59
SQLE-202ENST00000518604 BAG5Q9UL15 447 aa5.09□□□□□ -1.59
SQLE-202ENST00000518604 C1QL1O75973 258 aa5.08□□□□□ -1.6
SQLE-202ENST00000518604 TK1P04183 234 aa5.08□□□□□ -1.6
SQLE-202ENST00000518604 PAPOLAP51003 745 aaKnown RBP5.08□□□□□ -1.6
SQLE-202ENST00000518604 ACTR2P61160 394 aa5.08□□□□□ -1.6
SQLE-202ENST00000518604 TAF5Q15542 800 aa5.08□□□□□ -1.6
SQLE-202ENST00000518604 SMAD1Q15797 465 aaKnown RBP5.08□□□□□ -1.6
SQLE-202ENST00000518604 CERKLQ49MI3 558 aaPredicted RBP5.08□□□□□ -1.6
SQLE-202ENST00000518604 GLE1Q53GS7 698 aaKnown RBP5.08□□□□□ -1.6
SQLE-202ENST00000518604 ANKRD40Q6AI12 368 aa5.08□□□□□ -1.6
SQLE-202ENST00000518604 FCRLBQ6BAA4 426 aa5.08□□□□□ -1.6
SQLE-202ENST00000518604 DGAT2L7PQ6IED9 249 aa5.08□□□□□ -1.6
SQLE-202ENST00000518604 TMEM88Q6PEY1 159 aa5.08□□□□□ -1.6
SQLE-202ENST00000518604 AMIGO2Q86SJ2 522 aa5.08□□□□□ -1.6
SQLE-202ENST00000518604 ARHGEF25Q86VW2 580 aa5.08□□□□□ -1.6
SQLE-202ENST00000518604 LAS2Q8IYD9 372 aa5.08□□□□□ -1.6
SQLE-202ENST00000518604 AKAP1Q92667 903 aaKnown RBP eCLIP5.08□□□□□ -1.6
SQLE-202ENST00000518604 MECRQ9BV79 373 aa5.08□□□□□ -1.6
SQLE-202ENST00000518604 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.08□□□□□ -1.6
SQLE-202ENST00000518604 RASSF1Q9NS23 344 aa5.08□□□□□ -1.6
SQLE-202ENST00000518604 SERGEFQ9UGK8 458 aa5.08□□□□□ -1.6
SQLE-202ENST00000518604 VPS4AQ9UN37 437 aa5.08□□□□□ -1.6
SQLE-202ENST00000518604 SIRT4Q9Y6E7 314 aaPredicted RBP5.08□□□□□ -1.6
SQLE-202ENST00000518604 SPATA31A5Q5VU36 1347 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 SPATA31A6Q5VVP1 1343 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 SPATA31A7Q8IWB4 1347 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 CYP3A7-CYP3A51PA0A087WV96 503 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 TBC1D3DA0A087WVF3 549 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms