RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 MCEEQ96PE7 176 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 SYT15Q9BQS2 421 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 DDX4Q9NQI0 724 aaKnown RBP12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 MON2Q7Z3U7 1717 aa12.58□□□□□ -0.4
PCDHGA6-201ENST00000517434 ATXN2Q99700 1313 aaKnown RBP12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 KCNN4O15554 427 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 CDH3P22223 829 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 CCT3P49368 545 aaKnown RBP12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 RENBPP51606 427 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 CHN2P52757 468 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 SESN2P58004 480 aaPredicted RBP12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 ZNF844Q08AG5 666 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 LAYNQ6UX15 382 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 VSIG10LQ86VR7 867 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 OSCP1Q8WVF1 389 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 KLRG1Q96E93 195 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 PGM2Q96G03 612 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 GRIP2Q9C0E4 1043 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 ILKAPQ9H0C8 392 aaPredicted RBP12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 GTF3C4Q9UKN8 822 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 RNF103O00237 685 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 CLASP2O75122 1294 aaKnown RBP12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 DDHD2O94830 711 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 NR1H2P55055 460 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 DGUOKQ16854 277 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 PTRHD1Q6GMV3 140 aaKnown RBP12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 SLC30A10Q6XR72 485 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 ZDHHC17Q8IUH5 632 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 LACRTQ9GZZ8 138 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 CDC42EP4Q9H3Q1 356 aaKnown RBP12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 CLIC5Q9NZA1 410 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 RAB23Q9ULC3 237 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 ADCYAP1R1P41586 468 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 PTDSS1P48651 473 aaKnown RBP12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 FBXW4P57775 412 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 BST2Q10589 180 aaKnown RBP12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 PDK2Q15119 407 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 ZNF284Q2VY69 593 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 ATXN7L3BQ96GX2 97 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 RBBP8Q99708 897 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 TASP1Q9H6P5 420 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 KLHL11Q9NVR0 708 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 NCKAP1Q9Y2A7 1128 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 PRR23AA6NEV1 266 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 ZBTB39O15060 712 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 ZNF862O60290 1169 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 AQP5P55064 265 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 GAS2L1Q99501 681 aaPredicted RBP12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 OLFM1Q99784 485 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 APOL4Q9BPW4 351 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 CNPY3Q9BT09 278 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 RUSC1Q9BVN2 902 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 C1QTNF7Q9BXJ2 289 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 LATS2Q9NRM7 1088 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 SLC24A2Q9UI40 661 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 CLCA2Q9UQC9 943 aa12.57□□□□□ -0.4
PCDHGA6-201ENST00000517434 ATP9BO43861 1147 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 MED24O75448 989 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 ATXN8OSP0DMR3 200 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 GRB10Q13322 594 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 ITGA9Q13797 1035 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 KLHL12Q53G59 568 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 FAM171A1Q5VUB5 890 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 PLPPR4Q7Z2D5 763 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 EFL1Q7Z2Z2 1120 aaKnown RBP12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 GIPC3Q8TF64 312 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 FAM162AQ96A26 154 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 TMEM237Q96Q45 408 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 M0QYT0 321 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 ZNF263O14978 683 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 TM9SF1O15321 606 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 KCNK10P57789 538 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 EGFL6Q8IUX8 553 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 PPIL6Q8IXY8 311 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 CPA5Q8WXQ8 436 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 ARHGEF38Q9NXL2 777 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 AKAP7Q9P0M2 348 aaPredicted RBP12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 AFF4Q9UHB7 1163 aaKnown RBP12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 CRLS1Q9UJA2 301 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 HBS1LQ9Y450 684 aaKnown RBP12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 C2orf81A6NN90 581 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 PPP1R3GB7ZBB8 358 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 FCHO1O14526 889 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 IDH3BO43837 385 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 TLR2O60603 784 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 APOA4P06727 396 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 ADH1AP07327 375 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 FDFT1P37268 417 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 EIF1ADQ8N9N8 165 aaKnown RBP12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 TRPM4Q8TD43 1214 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 FNIP1Q8TF40 1166 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 L3MBTL3Q96JM7 780 aaPredicted RBP12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 ADAM2Q99965 735 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 SPATA2Q9UM82 520 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 SLC12A8A0AV02 714 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 CLOCKO15516 846 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 SNX3O60493 162 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 ATP6V1G1O75348 118 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 RHOCP08134 193 aa12.56□□□□□ -0.4
PCDHGA6-201ENST00000517434 STIP1P31948 543 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms