RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 CYP8B1Q9UNU6 501 aa18.23■□□□□ 0.51
DDX41-217ENST00000515562 LAMA1P25391 3075 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 C4orf47A7E2U8 309 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 WASH3PC4AMC7 463 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 PIK3R2O00459 728 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 MED7O43513 233 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 TIMM44O43615 452 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 SYNCRIPO60506 623 aaKnown RBP18.22■□□□□ 0.51
DDX41-217ENST00000515562 GABBR2O75899 941 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 IGLV3-27P01718 113 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 IL12RB1P42701 662 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 SLC11A2P49281 568 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 ARID5AQ03989 594 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 RING1Q06587 406 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 FUT11Q495W5 492 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 KIAA1324Q6UXG2 1013 aaKnown RBP18.22■□□□□ 0.51
DDX41-217ENST00000515562 UNC45BQ8IWX7 931 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 CEP76Q8TAP6 659 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 WFIKKN2Q8TEU8 576 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 CLEC4CQ8WTT0 213 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 CLEC4EQ9ULY5 219 aa18.22■□□□□ 0.51
DDX41-217ENST00000515562 CEP192Q8TEP8 1941 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 IRAK2O43187 625 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 CALCAP01258 141 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 ITPKAP23677 461 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 ACADSBP45954 432 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 RPL34P49207 117 aaKnown RBP18.21■□□□□ 0.51
DDX41-217ENST00000515562 IRX4P78413 519 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 ZNF33AQ06730 810 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 NNTQ13423 1086 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 ZNF234Q14588 700 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 CAMK4Q16566 473 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 SLC23A3Q6PIS1 610 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 TRIM65Q6PJ69 517 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 METTL3Q86U44 580 aaKnown RBP18.21■□□□□ 0.51
DDX41-217ENST00000515562 ZNF557Q8N988 423 aaPredicted RBP18.21■□□□□ 0.51
DDX41-217ENST00000515562 STK32AQ8WU08 396 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 ERLEC1Q96DZ1 483 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 TMA16Q96EY4 203 aaKnown RBP18.21■□□□□ 0.51
DDX41-217ENST00000515562 MIS12Q9H081 205 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 PRDM16Q9HAZ2 1276 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 UBE2TQ9NPD8 197 aaPredicted RBP18.21■□□□□ 0.51
DDX41-217ENST00000515562 TMEM74BQ9NUR3 256 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 CHMP5Q9NZZ3 219 aa18.21■□□□□ 0.51
DDX41-217ENST00000515562 ATXN2Q99700 1313 aaKnown RBP18.21■□□□□ 0.51
DDX41-217ENST00000515562 CKAP5Q14008 2032 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 TSPAN3O60637 253 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 NDUFS2O75306 463 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 KCNK5O95279 499 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 NCAM1P13591 858 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 HLA-FP30511 346 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 GPD2P43304 727 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 TBX4P57082 545 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 MPP7Q5T2T1 576 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 SERPINA13PQ6UXR4 307 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 BEND5Q7L4P6 421 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 MLKLQ8NB16 471 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 FOXJ1Q92949 421 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 FAM149B1Q96BN6 582 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 HSPA12BQ96MM6 686 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 SERPINB11Q96P15 392 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 SLC6A17Q9H1V8 727 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 ST7Q9NRC1 585 aa18.2■□□□□ 0.5
DDX41-217ENST00000515562 MUC22E2RYF6 1773 aaPredicted RBP18.19■□□□□ 0.5
DDX41-217ENST00000515562 TYW5A2RUC4 315 aaKnown RBP18.19■□□□□ 0.5
DDX41-217ENST00000515562 GTPBP10A4D1E9 387 aaKnown RBP18.19■□□□□ 0.5
DDX41-217ENST00000515562 CDX4O14627 284 aaPredicted RBP18.19■□□□□ 0.5
DDX41-217ENST00000515562 LETM1O95202 739 aaPredicted RBP18.19■□□□□ 0.5
DDX41-217ENST00000515562 CFIP05156 583 aa18.19■□□□□ 0.5
DDX41-217ENST00000515562 CD6P30203 668 aa18.19■□□□□ 0.5
DDX41-217ENST00000515562 GNA15P30679 374 aa18.19■□□□□ 0.5
DDX41-217ENST00000515562 DUOXA1Q1HG43 343 aa18.19■□□□□ 0.5
DDX41-217ENST00000515562 TMEM215Q68D42 235 aa18.19■□□□□ 0.5
DDX41-217ENST00000515562 SMYD5Q6GMV2 418 aa18.19■□□□□ 0.5
DDX41-217ENST00000515562 PSAPL1Q6NUJ1 521 aa18.19■□□□□ 0.5
DDX41-217ENST00000515562 GBP6Q6ZN66 633 aa18.19■□□□□ 0.5
DDX41-217ENST00000515562 AHI1Q8N157 1196 aa18.19■□□□□ 0.5
DDX41-217ENST00000515562 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.19■□□□□ 0.5
DDX41-217ENST00000515562 AZIN2Q96A70 460 aa18.19■□□□□ 0.5
DDX41-217ENST00000515562 DDX50Q9BQ39 737 aaKnown RBP18.19■□□□□ 0.5
DDX41-217ENST00000515562 MKRN2Q9H000 416 aaKnown RBP18.19■□□□□ 0.5
DDX41-217ENST00000515562 USP36Q9P275 1121 aaKnown RBP18.19■□□□□ 0.5
DDX41-217ENST00000515562 APEX2Q9UBZ4 518 aa18.19■□□□□ 0.5
DDX41-217ENST00000515562 GGA2Q9UJY4 613 aa18.19■□□□□ 0.5
DDX41-217ENST00000515562 TLR6Q9Y2C9 796 aa18.19■□□□□ 0.5
DDX41-217ENST00000515562 CNOT1A5YKK6 2376 aaKnown RBP18.19■□□□□ 0.5
DDX41-217ENST00000515562 THAP12O43422 761 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 ACSL4O60488 711 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 EPHX1P07099 455 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 SERPINF2P08697 491 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 ENGP17813 658 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 PRKCHP24723 683 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 NOVA1P51513 510 aaKnown RBP18.18■□□□□ 0.5
DDX41-217ENST00000515562 FAM133BQ5BKY9 247 aaKnown RBP18.18■□□□□ 0.5
DDX41-217ENST00000515562 SYCP2LQ5T4T6 812 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 N4BP2L1Q5TBK1 243 aaPredicted RBP18.18■□□□□ 0.5
DDX41-217ENST00000515562 PIK3R6Q5UE93 754 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 DENND1BQ6P3S1 775 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 TMPRSS6Q8IU80 811 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 CREBRFQ8IUR6 639 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms